Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00058 ATGGCGGCTAGTACGGACCCCGATGAACTCCAGGCCCTACTTTCCGAGCAGAGCGACGAGTTGTTTATGGCCAAAACCCTAGACTCCGATTTACACTTTGCTTTCGAACTGCAAATGCAGGAAGCCATTGTTGCCTCTCTCGCTTCACAACGATCAGCTTCAACTCTCGCGCCATTTACGTCTCCAGCTTGGCTTCCGGAGGGAGAGATAGATGACTCCGTTCTGGGCGTGGCGACGGAGCTTATGCTGGACGATGTGCAAAGTTTTACGCTACGACTGGTTGatcaagaaaaatgtcaagcGGAGATGGAGAAAACGCTGGAAGATTTGGACCGTCGGATTTTCGATCAGCAATTCGCTTgggaaatttttaatatgccTGAGGATGAGCGGAAAACCTACGGTGACAATTTCCATAGGCCCTACTACAGTGATGGAGCTTCGTCTtcgtcttcatcttctttgtcGCTGCGGAGCCCTTCTCTACAAACAGAGAATTTCAAATTGTACTTCAAGGGTTTAGTGAGCGAAGAGAGGGTTAGAGATATCAGGGTGGTTGTTGCTTCCGCTGGCATTGCCATCTGCGATTCGAGGGATTATCTGATTTTTGAAGTAAAGAAGCCTCTTGAAGCAGTGGAAAGTGGTGGATTGGTGTTGAGCAGTGAATGTGCTGAACTGCAAGCTTTGATTGAAGGTCTTGATATGGCTTTTAGCTTGGCATTACAAAGGCTAAGCATTTTCTTTGATGACTCTGCTTTACAATTATGTCATAGGCAGAGAGTCCGCAAGCAATGGAAAATTGGCAGGGCTAGTGAATCAGGTGTCTCATCTCCAAAAAATGTTTGTATCTTGTGTGCCATCTCTTGTTGGAAGGAATG 878 0.4431 MAASTDPDELQALLSEQSDELFMAKTLDSDLHFAFELQMQEAIVASLASQRSASTLAPFTSPAWLPEGEIDDSVLGVATELMLDDVQSFTLRLVDQEKCQAEMEKTLEDLDRRIFDQQFAWEIFNMPEDERKTYGDNFHRPYYSDGASSSSSSSLSLRSPSLQTENFKLYFKGLVSEERVRDIRVVVASAGIAICDSRDYLIFEVKKPLEAVESGGLVLSSECAELQALIEGLDMAFSLALQRLSIFFDDSALQLCHRQRVRKQWKIGRASESGVSSPKNVCILCAISCWKE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00058 292 Pfam Reverse transcriptase-like 188 253 IPR002156 GO:0003676|GO:0004523
Bva10g00058 292 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 37 255 - -
Bva10g00058 292 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 37 255 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00058 Bva-Chr10 1880461 1883613 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00058 160 253 C3H Transcription Factor Family AT2G19610 40.426 1.33e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00058 - - pavi:110770869 223.016