Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00053 ATGGACCCAAATAGCAACGGCAATGTGCACTCCTTTCgtccctttttccttttcaacgATTCTCATGGAGTTTCGAAGGAGGCCAAGCTGATTCAGATTCAGGATCAAATTCCCCTGCATACTGGAAATTGGGGAAAAATGAACAACGAAGTTACGTCCGTATGCCATATTGCTGGTCAGATCAACTCGAATGGCGTCTGGATGGGAGATGACCCACTTTCCTTTTCCCTCCCTCTTTTGTTGTTACAGCTTTCTCTCGTGTTCATTGTCACTCGCTGTATATGCCTTCTTCTCAAGCCCTTAGGTCAACCCTCCATTGTTTGTGATATTCTTGGTGGTATGACTTTAGGTCCTTCAATTCTAGGGCGCAGCCCAGCATTCACAGAAAAAGTTTTCCCTGCAAGAGCAAGAAGTTTACTTGAAACCTTTGCATTTTTTGGTTTCATGCTTTTTGTCTTCCTTGTTGGAGTAAAGATAGATCCAAGCATAGTTTTGAGATCAGATAAAAGAGCCTTGGTCATCGGAGTGTTACTCTTCTTTGTTCCTTTTGTACTTGCTGGATCAGTTGCCTATCTTCTTTACCAGTTTGCATCATTAGATCATGATGTTTCTAAGGCGCTTCAAATTGTGGTAGCAATTCAATGTTTGACGGCCTTTCCAGTAATTACCTGCTTCCTTTATGATCTCCAGATCCTCAATTCAGAGATTGGACGCTTGGCCTCTACTTCATCATTAGTTTCTGATATTTGCTTCTTGTGTTTTATGGCAATAAAATTCACCATAGATATAGCTGCCAAAAGGTCAGTAAGAGAATGTATTGGGTCCTTCTTGTCATGTGTCATGCTTATTTTGTTCATTGTGTTTCTAGTCCGTCCAGCAGTGCTATGGGTTATTCAACGCACCCCACAGGGAAAACCTGTAAAGGAGACATATATATTTGGGGTTCTCATGGTGGTAATGTTTTGTGGATTTATGGGTGAAGTGGTTGGCTTAAATGCTTGTGTTGCATCATTCGTCCTAGGGTTGGCTATACCCGATGGGCTACCATTAGGAGCTGCGCTTGTAGACACACTTGACTGCTTTGTTTCAGTATTGCTGATGCCTATCTTTTTTATGATTAGTGGATTAATGACAGATGTTTATGCCATTCGAAAGATGAACAATGTGGCTGTCATTCTGTTGATTATTTGTGTTGCTTTCTGCGGGAAATTTATAGCCACATTGCTGCCTCTCCTTTTATGTAGAATGCCATTTAGAGAtgtcatttctctctctttgatAATGAACAGTAAAGGCACCGTTGAATTGGCCTTGTTGATTTTGAGCAAGACACAAAATGTCCTGAATGAAGAATGCTTTTCCATTATGGTTCTTTCATTAGTGCTTATGTCAGTGATTTTGGCACCTCTTGTGAATGCTCTTTATGATCCTTCCAAGAGGTTCCTTGCCTACAAAAGGAGGACACTCTTGCATCACAGCAATGATGAAGAATTACGCATACTTGCTTGCATCCATAACCATGACAACATGCTAGCGATTTTAAACCTTCTTGCTGCCTCCAATGCCACTGAAGCAAGCTCCATTGAGTTAGTTGTGCTTCATCTTGTCAAGCTCGTAGGACGTGCTTCCTCACTACTAGTTGCACAGTTTCCAAGTGAAAAGATTGGTCAAGACCATACTCAATCTGAAAAGATTTTCAATGCATTTAGGAAATTGGGAGAACAGCACAAGGGCCATCTCACTTTGCATTGCTATAAAGGCATCTCTCCACATACTACAATGCACAATGATGTTTGCTATTTGGCACTTGAAAGGAGAATAGCCTTAATAATCATACCTTTTCATAAGCGGTGGATAGTTGGAAGGAGGGTAGAGTCATCTTTAGCCTATTGGCACCTCAACAAGAATGTTCTAGAGAAAGCTCCTTGCTCTGTTGGGGTTCTGATTGACCATGGGAATCAGAAGAAATTCTGGTCTGAGCATGCCGAGGCATCATCAACGTATAAAGTAGCTGTTTACTTCTTTGGCGGTCCAGATGATCGAGAAGGACTCGCATATGCAAAACGCATGATGGAACATCCTAATGTATATATCACTCTCTTTCATTTTACATCTTCAACAGAGATTGTATCTGGTTCAGCAAGGAGCAAAATGCTTGATACCAATATTTTGAGTGAATTTAGGCTCAATGCATTCAGAAATGATAGAGTCTCTTACAGAGAAGAGCAGGTACGCAATGGAAGGAGCGTGCTCGATGTGATTGAATCCATGGACAGTGTTTATGACCTCGTTATGGTTGGGAGAACACATGGTGATTCTCAGTTGATGTCCCAACTCAGGGAATGGCGCCGTGGAGAGTTAGGCTGTGTAGGAGAACTTCTTGCCACCATTGATATTGGCTTAGAAACTTCAGTTCTGGTGTTGCAACAACAAACTAGAGTATGGGGTTTGCGTGACCCAGAGGACTCCACACATTTAAGAAGAGTAAGTGTATA 2495 0.4104 MNNEVTSVCHIAGQINSNGVWMGDDPLSFSLPLLLLQLSLVFIVTRCICLLLKPLGQPSIVCDILGGMTLGPSILGRSPAFTEKVFPARARSLLETFAFFGFMLFVFLVGVKIDPSIVLRSDKRALVIGVLLFFVPFVLAGSVAYLLYQFASLDHDVSKALQIVVAIQCLTAFPVITCFLYDLQILNSEIGRLASTSSLVSDICFLCFMAIKFTIDIAAKRSVRECIGSFLSCVMLILFIVFLVRPAVLWVIQRTPQGKPVKETYIFGVLMVVMFCGFMGEVVGLNACVASFVLGLAIPDGLPLGAALVDTLDCFVSVLLMPIFFMISGLMTDVYAIRKMNNVAVILLIICVAFCGKFIATLLPLLLCRMPFRDVISLSLIMNSKGTVELALLILSKTQNVLNEECFSIMVLSLVLMSVILAPLVNALYDPSKRFLAYKRRTLLHHSNDEELRILACIHNHDNMLAILNLLAASNATEASSIELVVLHLVKLVGRASSLLVAQFPSEKIGQDHTQSEKIFNAFRKLGEQHKGHLTLHCYKGISPHTTMHNDVCYLALERRIALIIIPFHKRWIVGRRVESSLAYWHLNKNVLEKAPCSVGVLIDHGNQKKFWSEHAEASSTYKVAVYFFGGPDDREGLAYAKRMMEHPNVYITLFHFTSSTEIVSGSARSKMLDTNILSEFRLNAFRNDRVSYREEQVRNGRSVLDVIESMDSVYDLVMVGRTHGDSQLMSQLREWRRGELGCVGELLATIDIGLETSVLVLQQQTRVWGLRDPEDSTHLRRVSV 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00053 785 Gene3D - 451 739 - -
Bva10g00053 785 PANTHER OS08G0117800 PROTEIN 6 769 - -
Bva10g00053 785 Gene3D - 33 435 IPR038770 -
Bva10g00053 785 PANTHER CATION/H + ANTIPORTER 6 769 - -
Bva10g00053 785 Pfam Sodium/hydrogen exchanger family 41 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00053 Bva-Chr10 1814264 1817661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00053 2 785 Antiporter Super Family AT2G13620 38.376 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00053 - - gmx:102665255 959.903