Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00047 ATGGAAAACATAGACTACAGTTCTCATGGATTGATTGGCAAAGATAAGCTAGTATGTCAGGCTGTATACAAGGTCTCATCCGAGGGCCTTTGGAATTTACACAATCCTCTCAAAATATCCACATCTCTCCTAATCTTCCAGATCATTGTTATATTCATAGTCAGTAGAATCACTTATTTCCTGCTAAGACCCTTTCATCAAACAATGCTCACTTCACAGATCGTGGCAGGTATCATAATGGGTCCTTCATGTCTAGGAAAAGACAAAGCATACTTCgaaattttatttccaatGGGAAGCAGATTGGTGATTTCAACATTTGCAGAATTTGGTATCTTGTTTTACTTCTTTAAAGCTGGAGTTCAGGTGAATCCTAGCTATATCTTAAACATTGGAAGAGAACCAATTGTAATTGGTATTGTAGGGAATTGGGTTTCTGCCATATTTTCTGGTGTGACTTTCATTATTGTTAAGTCTGTGGCCAATATACCAAAGGAAATAGAGCCTAGCATTCTCCTTATAGTGGTCAATGGGGCTTTCACTTCTTTTGTTGTCTTAAGTGACTTCCTTCGTGAGTTGAAGATTCTCAATTCAGAGATTGGACGCTTGGCTTTATCATCTGCATTGATTAGTGATGCAGTGAGTTGGTTGGTGATATTTCTCATATTCAGAGTTGGTATGTTGTCATATAGACCAATTGCCGAAACAGTTATGATTGTGAGTTATTTCTCAGTTGTGTTCTTCCTTTTTAGGCCAATGGTTATATGGATCTCCAAGCGCAATCCCGATGGAAAACCCATGACACAAACCCATTTCTTGGCAATCATTTGCATgctcttttttgtttcattctcAGCACAATATGTTGGCATAAAAGGTTTCTTTGGTGCCTATATGTTTGGCTTGATTTTACCGGATGGTCCACCTTTGGGTTCTGTTTTATCAGATAAATTTGATAGTATATTTTCTGCTTTGCTTGTTCCTGTCTATTGTGCAATTAGTGGGTTCAATACAGACACTTCTGAATTAGCAGATCCACTCACAACAAACATTGAGTGTATCATACTATCTGGGTATATAGGCAAGTTTGTAGGCACCATTTTATCATCACTCTACCTTCAGTTTCAGACAAGGGATTCTTTTGCACTAGCTCTCATCATGTGCTGCAAAGGGATTAGTGAGCTCTGTCTAAACAGTGCACTATATGCCACCAAGGACTCAACCATGAAGATTTTTACCCTTTTGGTGATTAATTTGGTGGTTATAACTGGGCTTTTAACTCCGATTGTGCATTATATTTACGATCCTTCAAGGAAATACAAAAGCTACATTAGGAAAACAATTATTGATTCCGATAAAGACCTTGACTTTCGAATACTTGCTTGCATCTATGGTGAAGAAAATGTATATCCAATGATTAACCTTCTCCAACTCTCACACCCTCCAAATACTAAACCCTTGTCTGTATTTGTCATCCAACTAATGGAGCTCACGGGAAGGGCTGCCTCCATCCTTAAGAAAAATACGACAAAAGTCAAGTCATTTTCAAAGATGACTCCAATTCAGCACATAGCTAATGTCTTTGATCAGTTTGAGCTGCAACATAAAGAGGGTTTCACGGTGCAGAACTTCACTGCAAATGCACCATTTGCAACCATGCATGAAGATATATGCACCATGGCAATGGACAAGAGAACAAACATTGTAATTCTTCCATTTCACAAGCAATGGACTGTTGATGGACAAGCTGAGGTTTCACATCCTTTGATTAGGACAGTAAACCAGAATGTTTTAAAGAGGGTTCCTTGCTCTGTTGGAATTctaattgaccgaagccataTGGCAGGAAAAGTGTTAATTATCTCTGAGAATTCATGCTACAGAATTGCTATGATCTTCCTAGGCGGCAATGATGATCGAGAGGCATTAGCCTACGCCATGCACATGGTGGGACATTCACATGTAACTCTCACAATAGTATGCATCTCATCAGAAAGAGACCGTAAACatattaacaagaaaaacaattgtAGCTTATCGGAGTATGTAAAGGCATGTGCGATGAGTCGTGGCGATGTGAGTTTCAATGAAGAGATTGTGCAGGATGGGGCAGGAACTACAGAAGTTATCCGAAAGATGGAGAGCAATGTGGATATGGTCATAGTAGGTAGACACCAAGACACAAGCTTTTCTAGTATACTAGGGTTGACAGAATGGAGTGAGCACCCTGAGCTCGGGCCAGTTGGGGACTTGCTAGCCTCTTCAGATTTTAGATTTTCAGTTTTGGTGGTGCAAGAAAAATTCTCTAGGTATGATTCCTGGATATA 2327 0.3838 MENIDYSSHGLIGKDKLVCQAVYKVSSEGLWNLHNPLKISTSLLIFQIIVIFIVSRITYFLLRPFHQTMLTSQIVAGIIMGPSCLGKDKAYFEILFPMGSRLVISTFAEFGILFYFFKAGVQVNPSYILNIGREPIVIGIVGNWVSAIFSGVTFIIVKSVANIPKEIEPSILLIVVNGAFTSFVVLSDFLRELKILNSEIGRLALSSALISDAVSWLVIFLIFRVGMLSYRPIAETVMIVSYFSVVFFLFRPMVIWISKRNPDGKPMTQTHFLAIICMLFFVSFSAQYVGIKGFFGAYMFGLILPDGPPLGSVLSDKFDSIFSALLVPVYCAISGFNTDTSELADPLTTNIECIILSGYIGKFVGTILSSLYLQFQTRDSFALALIMCCKGISELCLNSALYATKDSTMKIFTLLVINLVVITGLLTPIVHYIYDPSRKYKSYIRKTIIDSDKDLDFRILACIYGEENVYPMINLLQLSHPPNTKPLSVFVIQLMELTGRAASILKKNTTKVKSFSKMTPIQHIANVFDQFELQHKEGFTVQNFTANAPFATMHEDICTMAMDKRTNIVILPFHKQWTVDGQAEVSHPLIRTVNQNVLKRVPCSVGILIDRSHMAGKVLIISENSCYRIAMIFLGGNDDREALAYAMHMVGHSHVTLTIVCISSERDRKHINKKNNCSLSEYVKACAMSRGDVSFNEEIVQDGAGTTEVIRKMESNVDMVIVGRHQDTSFSSILGLTEWSEHPELGPVGDLLASSDFRFSVLVVQEKFSRYDSWI 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00047 775 PANTHER CATION/H(+) ANTIPORTER 14 34 767 - -
Bva10g00047 775 CDD USP_Like 635 764 - -
Bva10g00047 775 Gene3D - 41 441 IPR038770 -
Bva10g00047 775 Gene3D - 534 752 - -
Bva10g00047 775 Pfam Sodium/hydrogen exchanger family 49 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva10g00047 775 PANTHER CATION/H + ANTIPORTER 34 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00047 Bva-Chr10 1742305 1745553 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00047 9 767 Antiporter Super Family AT1G06970 36.753 5.73e-177 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00047 - - gsj:114396278 781.941