Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00044 atggatgagaACGGCGAAGAGAAATTATTGGCTGTGGCGCGGCACATAGCAAAAACGCTGGGCCACAATAGCAATATGGCTGATGATATTCTTCAAATCTTCTCCAACTTCGACGGTAGATTCTCCCTGGAGAAGTTATCAGAGACGGGTGGAGAAAATGATCCCAGAGGGAGTGCCGCACTTGAACATGCCCTAAAGTCTCTCGACCGTCGGATCTCCCAGTACGTATCATCTGATCAACCGATCTGGGCCGACTCTGCCGACTCCTCCGCCTTCCTCGACGCAATCGATGAGTTAATAGCTACCATCAACCACTGGAACCCCATGGCGGTGGATAAGACCGTCAGCGCGTGTTTGGTACGCGCCGATGAATTGCTCCAGCAGGCCATGTTCCGTATGGAGGATGAGTTCCGGTCTCTGATGGAACGCAGCGGTGAGTCGTTTGACGTGAGTCGAGCATATTCTAACGGCGAGTCTACCGGGAACATGTCGTTTGACTCGGAGGAAGACGGTGAAGTAGAAGGGGTTATTCGAAACGGCGAAGAGGACCAGATTCTTGTGGCGCGACCAGTTTCCGACTACGACATCGTCATCGACGCGCTACCTTCTGGTACCATCAACGATCTTCACGAAATTGCAAAACGCATGGTGGCTGCTGGATTTGGTAAAGAGTGTTCTCACGTTTACAGCAGTTGCCGGAGAGAATTTATAGAAGAGAGCTTGTCGAGATTGGGGCTACAAAATCTCAGCATCGAAGACGTTCACAAGATGCCATGGCAGGATCTTGAAGACGAGATTGAAAGGTGGATGAAAGCTTGCAACGTCGCTCTTAGAATCCTGTTTCCGAGTGAACGGCGGCTCTGTGATCGTGTCTTCTTCGGGTTCTCCTCAGCTGCTGATCTCTCATTCATGGAGGTTTGTCGGGGATCGACTATTCAGCTACTCAATTTCGCCGATGCCATCGCGATTGGGAGCCGGTCACCGGAGCGGTTGTTCAGAATCCTTGACGTGTTCGAGACACTGAGGGATTTAATGCCTGAATTGGATTCCATGTTCTCTGATCaatattgtttctttctcaGAAATGAGGGAATTACAATTTGGAAGAGGTTAGGGGAAGCAATTAGGGGAATTTTCATGGAGTTGGAGAATCTTATTCGAAGAGACCCAGCAAAGGCAGCTGTTCCCGGTGGTGGGTTTCATCCAATTACCCGTTACGTGATGAATTATCTCCGAGCGGCATGCCAGTCCCGGCAGACACTGGAGCAAGTATTTGAAGACGATGGGCTTCCATTGAAGGACTATCCTAAGCTTGATGATAGActgtcatcttcttcttcactgTCTGTTCAAATGGATTGGATTATGGAATTATTAGAGAGTAATTTAGAGGCCAAATCCAAAATCTACAAGGACTCTGCTTTAAGCTCTGTTTTCATGATGAACAATGGGCACTACATAGttcagaaagcaaaagatAGTGAATTGGGAACACTTTTAGGCGAAGATTGGATCCGAAAACACACTGCCAAAGTGAGGCAACACCATGTGAATTACCAAAGAAGCTCATGGAACAAGGTGCTGAGCTTGTTGAAGCTAGAGAATGGTTCATTGGCATCTAGTATAGCTGCCAAGTCTATGAAAGAGAAGCTCAGGTTGTTCAACATGCAGTTTGAGGAGATATGCAGGGTTCAATCCACATGGATTGTGTTTGATGAGCAACTAAGGGAAGAGATAAGAATTTCCCTGGAGAAAATCTTATTGCCGGCGTATGGAAACTTCCTTGGAAGGTTCCAGAATGTTCCAGAACTCAGCAAGCATGCTGATAAATTTGTCAATTATGGAGTGGAGGACATTGAAGCTAGGATTAACCATTTGTTTCAGGGAAACAGTGGATCAGCTGGTAGCCGAAAGTG 1916 0.4598 MDENGEEKLLAVARHIAKTLGHNSNMADDILQIFSNFDGRFSLEKLSETGGENDPRGSAALEHALKSLDRRISQYVSSDQPIWADSADSSAFLDAIDELIATINHWNPMAVDKTVSACLVRADELLQQAMFRMEDEFRSLMERSGESFDVSRAYSNGESTGNMSFDSEEDGEVEGVIRNGEEDQILVARPVSDYDIVIDALPSGTINDLHEIAKRMVAAGFGKECSHVYSSCRREFIEESLSRLGLQNLSIEDVHKMPWQDLEDEIERWMKACNVALRILFPSERRLCDRVFFGFSSAADLSFMEVCRGSTIQLLNFADAIAIGSRSPERLFRILDVFETLRDLMPELDSMFSDQYCFFLRNEGITIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGFHPITRYVMNYLRAACQSRQTLEQVFEDDGLPLKDYPKLDDRLSSSSSLSVQMDWIMELLESNLEAKSKIYKDSALSSVFMMNNGHYIVQKAKDSELGTLLGEDWIRKHTAKVRQHHVNYQRSSWNKVLSLLKLENGSLASSIAAKSMKEKLRLFNMQFEEICRVQSTWIVFDEQLREEIRISLEKILLPAYGNFLGRFQNVPELSKHADKFVNYGVEDIEARINHLFQGNSGSAGSRK 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00044 638 Pfam Exo70 exocyst complex subunit 267 624 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva10g00044 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 628 IPR004140 GO:0000145|GO:0006887
Bva10g00044 638 Gene3D Exocyst complex component Exo70 79 637 - -
Bva10g00044 638 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 628 - -
Bva10g00044 638 SUPERFAMILY Cullin repeat-like 83 627 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00044 Bva-Chr10 1576398 1578512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00044 1 631 EXO70 exocyst subunit family AT5G58430 71.203 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00044 K07195 - gmx:100803694 974.541