Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00024 atggcCACAGAAGCAACAGCCAAATTCCAAAAGCCTGACTTTCGCCCTGTTCCGCAGCCGCCAGATTTCCATCCAGAAGTGATGGTGTCTGCCCACGACGGCCTCCACTTCTGGCAGTTCATGCTCGCTGGCTCTGTCGCCGGCTGCATTGAACACATGGCCATGTTCCCCGTCGACACCGTGAAGACCCACATGCAAGCTCTCGGGTCGTGCCCGATTAGGTCAGTTAGCGTTCGACTGGCTCTTCAATCAATTATGAAAACTGAGGGTCCTTCTGCTCTCTACCGTGGCATTGGCGCCATGGGTCTGGGTGCTGGACCTGCACACGCAGTGTATTTCTCTGTTTATGAGGTTTGTAAGAAATATTTCTCTCATGGAAATCCTGATAATTCCAAGGCACATGCCATTTCAGGTGTGTGCGCTACTATTGTTAGTGATGCTGTGTTTACCCCTATGGATATGGTTAAGCAAAGGTTGCAATTGGGTGATGGTAGTTATAAGGGTGTTTGGGATTGTGTAAAGAGGGTGCTGAGTGAGGAGGGATTTGGAGCATTCTATGCTTCTTATAGGACTACGGTTTTGATGAATGCACCATTTACGGCAGTGCATTTTTCTACATATGAAGCTGCAAAAAAGGGTCTAGTGGGGATTTCTCCAGAAAGTGCTGATGATGAACGTTTGATTGTTCATGCAACAGCTGGAGCTGCGGCCGGGGCTCTGGCTGCTGCAGTTACAACGCCATTGGATGTGGTTAAAACTCAATTGCAGTGTCAGGGTGTCTGCGGGTGCCATCGATTTAAAAGCGGTTCAATTAGTGATGTGATAAAAACAATAGTGAAGAAGGATGGATACAGAGGGCTCGTTAGGGGATGGATTCCAAGGATGCTTTTCCATGCTCCTGCTGCTGCAATCTGTTGGTCCACATATGAAGCTGGAAAGAGCTTTTTCCAAGAATTAAACGATGGGCAATTCGTTTA 977 0.477 MATEATAKFQKPDFRPVPQPPDFHPEVMVSAHDGLHFWQFMLAGSVAGCIEHMAMFPVDTVKTHMQALGSCPIRSVSVRLALQSIMKTEGPSALYRGIGAMGLGAGPAHAVYFSVYEVCKKYFSHGNPDNSKAHAISGVCATIVSDAVFTPMDMVKQRLQLGDGSYKGVWDCVKRVLSEEGFGAFYASYRTTVLMNAPFTAVHFSTYEAAKKGLVGISPESADDERLIVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCHRFKSGSISDVIKTIVKKDGYRGLVRGWIPRMLFHAPAAAICWSTYEAGKSFFQELNDGQFV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00024 325 PANTHER MITOFERRIN-1-RELATED 1 322 - -
Bva10g00024 325 Gene3D Mitochondrial carrier domain 216 324 IPR023395 -
Bva10g00024 325 Gene3D Mitochondrial carrier domain 21 215 IPR023395 -
Bva10g00024 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 322 - -
Bva10g00024 325 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Bva10g00024 325 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Bva10g00024 325 Pfam Mitochondrial carrier protein 133 214 IPR018108 -
Bva10g00024 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Bva10g00024 325 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Bva10g00024 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Bva10g00024 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Bva10g00024 325 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Bva10g00024 325 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Bva10g00024 325 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Bva10g00024 325 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Bva10g00024 325 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00024 Bva-Chr10 1188470 1192119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00024 1 320 Chloroplast and Mitochondria Gene Families AT2G30160 76.923 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00024 K15113 - qsu:112000477 557.37