Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00013 ATGTCTACACAACAAGAAGCTAAGGAACAAGGAGCTTCCTCCTTTCACCGAAAGAGCAACGCAAAATCAACCCTTGACGGTAATGGTGACCCAAATGAAAACGAGATGTGTCAATTAACTAAGCCGGAGGACGATCACGAGCGCGTGCCACTGGCCAACGCGGCGAGGATAATGCGCCAAGTTCTTCCACCGCATGCAAAAATATCCGACGACGCCAAAGAAACTATTCAAGACTGTGTTTCTAAGTACATCGGCGTAATTACTTGTAAAGCCAACAAACGGTGTTGTGACGAGAGCCGTGTGAAGGTAACGGCTGAGGATGTGCTGTTGGCAATCGAGGAACTTAAACTGGACCAGTATGTGGATCCTCTCAAAGTTTTCATCACTCGATACCGTGAAAATGAGAATGTCAGCTCTTGCATGCATGGGAATGGCGGGAAGAGGAGCAGCTGCTACCGTGATGATTATTGGCCGCCAATTGGGCTTCCACAAACATTGGATGCTAGTTATGGGCCTCAAAATGGGCTTCCTCCAACAATGTTGGGTATTTATGGGCCACCATCTTCTATGGGCCCAAATCAAAATTCCAGTTG 593 0.4755 MSTQQEAKEQGASSFHRKSNAKSTLDGNGDPNENEMCQLTKPEDDHERVPLANAARIMRQVLPPHAKISDDAKETIQDCVSKYIGVITCKANKRCCDESRVKVTAEDVLLAIEELKLDQYVDPLKVFITRYRENENVSSCMHGNGGKRSSCYRDDYWPPIGLPQTLDASYGPQNGLPPTMLGIYGPPSSMGPNQNSS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00013 197 MobiDBLite consensus disorder prediction 1 35 - -
Bva10g00013 197 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Bva10g00013 197 PRINTS CCAAT-binding transcription factor subunit A signature 114 132 - -
Bva10g00013 197 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Bva10g00013 197 Gene3D Histone, subunit A 35 151 IPR009072 GO:0046982
Bva10g00013 197 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 19 141 - -
Bva10g00013 197 MobiDBLite consensus disorder prediction 1 44 - -
Bva10g00013 197 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 19 141 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva10g00013 197 SUPERFAMILY Histone-fold 48 151 IPR009072 GO:0046982
Bva10g00013 197 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 48 112 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00013 Bva-Chr10 898489 900475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00013 24 178 CCAAT-HAP3 Transcription Factor Family AT1G21970 45.679 2.63e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva10g00013 CBFD_NFYB_HMF 1.6e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00013 K08065 - qlo:115956131 129.028