Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02201 ATGGAAAATCTTGCCGCGCAATTGAAGCGCGGCATCTCGCGCCAATTCTCTACCGGCTCACTTCGCAGGAATCTAAGCCGGCAATTCACGCGGCAAGCGTCGTTGGATCCGAGGAGGAACAATCTCAGATTCAGTTTTGGTCGGCAGTCCTCGCTCGATCCCATTCGGCGCAGTCCGGGCGATGATGCTGACCTGACAGTTCCAGAGAATCTCGACTTCACGATGCAGCTGTTATTCATGGCCTGCAGAGGAGACGCGAGGGGAGTAGAAGATTTACTAAATGAGGGGATTGATGTGAATAGCATTGATTTAGATGGGCGCACTGCCTTGCATATCGCGGCTTGTGAAGGACATGTCGATGTTGTAAAGCTCTTGCTTAGCCGCAAGGCTAACATTGATGCTCGTGATCGTTGGGGTAGTACGGCAGCGGCTGACGCCAAATACTATGGAAATACAGAAGCttacaatatattaaaagccCGTGGAGCCAAAGTGCCGAAAACCAAGAAAACTCCGATGACTGTTGCAAATCCTCGTGAAGTTCCAGAATATGAACTTAATCCATTAGAACTCCAAGTCCGAAGGAGTGATGGTATTTCAAAGGGAGCATATCAAGTAGCTAAATGGAATGGTACAAAGGTTTCAGTGAAGATACTTGATAAGGACAGTTATTCTGACCCCGACAGCATAAATGCTTTCAAAAATGAGCTTACCTTATTAGAAAGGGTGCGGCATCCTAATGTGGTACAGTTTGTTGGCGCCGTTACCCAAAATATACCCATGATGATTGTTTCAGAGTATCATCCTAAGGGTGACCTAGCAAGCTATCTTCAGAAAAAAGGGCGTCTATCCCCTTCAAAAGCTCTACGGTTTGCACTGGATATTGCGAGGGGCATGAACTATCTTCACGAGTGTAAACCAGATCCAGTTATTCATTGTGATTTGAAGCCAAAAAATATTTTGCTGGATAATGGAGGGCAGTTGAAGGTAGCTGGATTTGGCATGGTAAGATTGTCAAAGATTTCACCTGATATGGGAAGGCTGGTTCAGCCTGGGGCTAACATTGACCTTTCAAGCTTGTACCTTGCACCAGAGGTTTACAAAGATGAAATATTCAATAGAAGTGTGGATGCATATTCTTTTGGTCTCGTTCTATATGAGATGATGGAGGGTATACAGCCCTTCCACCCAAAGTCCCCAGATGAGGCCTTGAAATTGATGTGCTTGGAAGGAAAAAGACCATCATTCAAGACAAAGTCTAAAAGTTATCCTCCAGATTTAAAAGAGTTGATTGAGGAATGTTGGGACCCAGAACCATTTGTCAGGCCAACCTTTTCTGAAGTCATTGTACGGTTGGACAAAATTGTTGCAAACTGCTCAAAACATGGGTGGTGGAAAGATACTTTCAAACTTCCTTGGAAATA 1424 0.4445 MENLAAQLKRGISRQFSTGSLRRNLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPGDDADLTVPENLDFTMQLLFMACRGDARGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVDVVKLLLSRKANIDARDRWGSTAAADAKYYGNTEAYNILKARGAKVPKTKKTPMTVANPREVPEYELNPLELQVRRSDGISKGAYQVAKWNGTKVSVKILDKDSYSDPDSINAFKNELTLLERVRHPNVVQFVGAVTQNIPMMIVSEYHPKGDLASYLQKKGRLSPSKALRFALDIARGMNYLHECKPDPVIHCDLKPKNILLDNGGQLKVAGFGMVRLSKISPDMGRLVQPGANIDLSSLYLAPEVYKDEIFNRSVDAYSFGLVLYEMMEGIQPFHPKSPDEALKLMCLEGKRPSFKTKSKSYPPDLKELIEECWDPEPFVRPTFSEVIVRLDKIVANCSKHGWWKDTFKLPWK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02201 474 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 472 - -
Bva09g02201 474 ProSiteProfiles Protein kinase domain profile. 189 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02201 474 SUPERFAMILY Ankyrin repeat 76 175 IPR036770 -
Bva09g02201 474 SMART serkin_6 193 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02201 474 Gene3D Transferase(Phosphotransferase) domain 1 269 468 - -
Bva09g02201 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Bva09g02201 474 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Bva09g02201 474 Gene3D - 57 184 IPR036770 -
Bva09g02201 474 SUPERFAMILY Protein kinase-like (PK-like) 202 452 IPR011009 -
Bva09g02201 474 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 472 - -
Bva09g02201 474 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
Bva09g02201 474 PRINTS Tyrosine kinase catalytic domain signature 304 322 IPR001245 GO:0004672|GO:0006468
Bva09g02201 474 PRINTS Tyrosine kinase catalytic domain signature 265 278 IPR001245 GO:0004672|GO:0006468
Bva09g02201 474 PRINTS Tyrosine kinase catalytic domain signature 376 398 IPR001245 GO:0004672|GO:0006468
Bva09g02201 474 PRINTS Tyrosine kinase catalytic domain signature 423 445 IPR001245 GO:0004672|GO:0006468
Bva09g02201 474 CDD STKc_MAP3K-like 199 452 - -
Bva09g02201 474 PIRSF ILK 8 473 - -
Bva09g02201 474 Pfam Ankyrin repeats (3 copies) 79 165 IPR002110 GO:0005515
Bva09g02201 474 Pfam Protein tyrosine and serine/threonine kinase 201 451 IPR001245 GO:0004672|GO:0006468
Bva09g02201 474 Gene3D Phosphorylase Kinase; domain 1 187 268 - -
Bva09g02201 474 SMART ANK_2a 73 101 IPR002110 GO:0005515
Bva09g02201 474 SMART ANK_2a 105 134 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02201 Bva-Chr9 18141713 18149519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02201 1 473 MAP Kinase Kinase Kinase AT2G43850 79.916 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Bva09g02201 PK_Tyr_Ser-Thr 3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02201 - - gmx:100810411 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02201 09 18141713 18149519 Bva09g02201 09 18141713 18149519 ECH