Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02186 ATGCTGCTGAGTTTAAGCCTGAACTGGAGATGCTCCGGCTCCCTCCTTGTCCTTGCTGAGGTGATTACTGTGGTCAGTTTGATTCTCTCTTTTAACATGACGAAACGAAACAGTAATGCTACTGACATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAAAGGGTTTTCGTCCCTCACTCTAAGGAGAAGCTAGTTAATGATGGCGAGAAGAAAACCagcacaaaagaaaagaaaaagaaaggtctAGGGAAGTTAAGGCATGGGGAGACGAATTCATTCATTCCCTTGTTCAGAGAACCGAGTAGCATTGAGAAGATCTTTGGGGAGTTTGAAAGAGAGCAACAAGTATTGAGTTTGAGGCCTCCTACACCTACCGAGCAACCCAAAACAACAACACCGCCACCTCCACGGGTTGCCTCTCCTAGTCCTAGGGTAGCTTCTCCCAGAGCTGCATCTCCACGGGTTGCCTCTCCTAAACCACGGATTGTTCATCACCACAAGGACCTTGGCTACAGACCAGAACCAACTCTCGCCAACCTCCATGCCTCGGCAACTAAGATCCAGGCTACTTATAGAGGTTACACGGCTAGGAGGAGTTTCAGAGCTCTAAAGGGTCTGGTGAGGCTTCAAGGAGTGGTCAGAGGACAGAATGTGAAGCGGCAGACGGTGAACGCCATGAAACACATGCAGCTGTTGGTGCGAGTTCAATCTCAGATTCAATCCCGGAGGATCCAGATGTTGGAAAATCAGGCACGATATCAAGCTGAACACAAGAATGATGCAGCTTTGGGCAAGTTTAATTTAGGCCAAGCTTCTGAGGGAGGTAACGAAGACTGGGATGATAGCTTACTGACAAAGGAGGAAATAGAGGCAAGGTTGCAGAGGAAGATAGAAGCTAtcatcaaaagagaaagagcaaTGGCATATTCATATTCCCATCAGTTATGGAAATCCACTCctaaatcaaatgaaaccCCACTGAGAGATATGCGATCTGGGGGATTTCCATGGTGGTGGAACTGGTTGGAACGACAATTACCTTCAGCAAGCCCACAAGAGAGCCAAGTAGTGAAGAATTTTCAACTCACACCTCCGAGACCATACTCAGAACAGAAGACTAGTCCAAGACCCTCCTCAAGCACTCAAAACCAGCAGCAGCATCAATTTGGTTTTGATACTCCAAAATCCACCAAGTCCTCTATCCTGACATCTACAAGACCACCTAGAACCCCTCCAGCAAATGGCAACAGCTCTGGCTTGTTGAAATATTCAAGAGCAAGGGCTGCGCCTTTAGATGTGCCGTTGAAAGATGATGACAGCCTCATAAGCTGCCCTCCATTTTCAGTCCCAAGTTACATGGCTCCAACACTTTCTGCCAAAGCCAAAGTACGTGCCAATAGCAATCCAAGAGAAAGGTTTTCTGCTGCTGCCTCTCCAAGCTCTGAATCAAAGAGGAGactttcatttcctttggcTCAAGGGATTAGCTCTTTTAAATGGGCCAAGAACTCACCCTTCTCGTCAAAGGGTCCTAGCTCTCACAGGGGTTTGGATAAAAATCAATCTCTTCAATCTTTAGGAAACTTGAGTGTGGATTCAACGGTTTCTTTGCCCGTAGGGGTTGGAAGAAAGCCGTTTAACAGATTTGTGTG 1655 0.4489 MLLSLRTKRNSNATDMGKKGSWFSAIKRVFVPHSKEKLVNDGEKKTSTKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGEFEREQQVLSLRPPTPTEQPKTTTPPPPRVASPSPRVASPRAASPRVASPKPRIVHHHKDLGYRPEPTLANLHASATKIQATYRGYTARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEHKNDAALGKFNLGQASEGGNEDWDDSLLTKEEIEARLQRKIEAIIKRERAMAYSYSHQLWKSTPKSNETPLRDMRSGGFPWWWNWLERQLPSASPQESQVVKNFQLTPPRPYSEQKTSPRPSSSTQNQQQHQFGFDTPKSTKSSILTSTRPPRTPPANGNSSGLLKYSRARAAPLDVPLKDDDSLISCPPFSVPSYMAPTLSAKAKVRANSNPRERFSAAASPSSESKRRLSFPLAQGISSFKWAKNSPFSSKGPSSHRGLDKNQSLQSLGNLSVDSTVSLPVGVGRKPFNRFV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02186 524 PANTHER IQ-DOMAIN 13 16 521 - -
Bva09g02186 524 MobiDBLite consensus disorder prediction 437 460 - -
Bva09g02186 524 MobiDBLite consensus disorder prediction 34 61 - -
Bva09g02186 524 Pfam Protein of unknown function (DUF4005) 384 468 IPR025064 -
Bva09g02186 524 MobiDBLite consensus disorder prediction 337 395 - -
Bva09g02186 524 MobiDBLite consensus disorder prediction 100 116 - -
Bva09g02186 524 Pfam IQ calmodulin-binding motif 155 175 IPR000048 GO:0005515
Bva09g02186 524 PANTHER IQ-DOMAIN 5-RELATED 16 521 - -
Bva09g02186 524 SMART iq_5 153 175 IPR000048 GO:0005515
Bva09g02186 524 MobiDBLite consensus disorder prediction 34 50 - -
Bva09g02186 524 MobiDBLite consensus disorder prediction 476 495 - -
Bva09g02186 524 Gene3D - 152 206 - -
Bva09g02186 524 ProSiteProfiles IQ motif profile. 154 182 IPR000048 GO:0005515
Bva09g02186 524 MobiDBLite consensus disorder prediction 445 460 - -
Bva09g02186 524 MobiDBLite consensus disorder prediction 91 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02186 Bva-Chr9 18026750 18030900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02186 16 523 IQD Protein Family AT3G59690 52.174 2.77e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02186 - - qsu:111987895 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02186 09 18026750 18030900 Bva09g02186 09 18026750 18030900 ECH