Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02180 ATGATGGAACAGAAAAGGAGCCCCTGCTCTGTGGACCAAAGCAGTTTTACCTCTATCGCATCTAAAAGACATAAAGCTGATCTTTCTATCACCACAAAGGAGAGGAAGGAGAAGCTTGGGGAAAGGATTGTTGCCCTACAGCAGCTTGTTTCACCATATGGGAAGACAGATACAGCTTCTGTTCTCCTGGAGGCAATGGAATATATAACTTTCCTTCATGAACAAGTTAAGGTGCTCAGTGCTCCTTATCTCCAAAGTTCGACAAGCAAGATGCAGGACATAGAGCCATACAGCCTGAGGAGTAGAGGATTATGCGTTGTTCCAGTCTCATATACAATTGGAGTTGCTCGGAGCAACGGTGCAGATATCTGGGCTCCCATCAAGACCACTTCTCCTAAATTTGATAAGCCTATCACCCAATTTCATTG 428 0.4463 MMEQKRSPCSVDQSSFTSIASKRHKADLSITTKERKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYITFLHEQVKVLSAPYLQSSTSKMQDIEPYSLRSRGLCVVPVSYTIGVARSNGADIWAPIKTTSPKFDKPITQFH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02180 142 CDD bHLH_AtbHLH_like 29 80 IPR045239 -
Bva09g02180 142 Gene3D - 20 95 IPR036638 GO:0046983
Bva09g02180 142 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 126 - -
Bva09g02180 142 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 1 126 - -
Bva09g02180 142 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
Bva09g02180 142 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 29 86 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02180 Bva-Chr9 17987238 17990843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02180 1 134 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.228 1.50e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02180 - - pper:18793757 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02180 09 17987238 17990843 Bva09g02180 09 17987238 17990843 ECH