Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02179 ATGGCATCAAATGACCTCCCACCATCTTTGGAGATATTAGTTCGAGGGCCAGAAGAATTCTCTCTCTGGAATGGACCTCCCTTCATCAATGGTCAACCTGGTGTCAAGCTTGATAAAGTTATTTGTGTGAGTGcaaatttcaatgaaaatggatCTAAAATCATGGTGATGAAATCCAACTCAGTGATTAGCATATATGATTGTGCAAGCAAAAAAGAGATTAGATCTTTTGAAGTCCCCAATGTTGCTGCAGGCGTCTTGTCCCCTTGTGGAACTTATTTGCAAACCTTTCAAAAATCCTCAACGccacaagaaaagaatgtGACTCTGTGGAAAATAGACACTGGTGATCCAGTTTATCAACTCTTCCAAAAGAACCTGACAAAAACCACTTGGCCCTCAATCCAATTCAGCTCTGATGAAACTGTTGCATGTCGGTTGGCAACTAATGAGGTACAATTTTTTGACACGGGAGATTTCTCTAAAGGAGTTATCTATCGGATAAGAGTTCCAGGTGTTGCTGGCATTGAACTTTCTAGGACACCCGGGTCTCATGTGGCAGCATTTGTTCCAGAATCCAAGGGGGGTCCTGCTAGCGTACAGATATTTTCTTGTGGAAAAGATTCTCAAAGTCAACCTATTGCTCGACGGAGTTTTTTTCGGTGTTCTACTGTCCAGCTTAGGTGGAACCATGGCTCTACTGGGCTTCTAGTGGCAGCGCATTCAGATGTTGATAAAACTAATCAGAGTTACTATGGAGAATCAAAGTTATGCTACTTGACAACGGATGGATCGCATGAAGGGCTTGTACCTCTCCGTAAAGAAGGACCTGTTCATGATTCTCAGTGGTCATATTCTGGCTTGGAATTTGCTGTTGTATATGGTTTTATGCCTGCTAAAGCAACTGTGTTTGACAAGAGGTGTAATCCTCTATTGGAGCTTGGAACTGGCCCTTACAATACAATTCGATGGAACCCTAAAGGCAAATTTTTATGTTTGGCTGGCTTTGGTAATTTGCCTGGTGACATGGTATTTTGGGATTACCAAGAGAAGAAACAACTTGGAACAACCAAGGCTGAATGGTCTGTGACCAGTGAATGGTCTCCAGATGGATGCTATTTCATGACAGCCACAACAGCTCCAAGGCGTCAAGTTGATAATGGGATCAAGATTTTCCACTACAATGGGTCATTGTACTTCAAGAAGATGCTTGAAAAGTTGTATCAGGCTGACTGGAGACCGGAGTCACCAAATAAATTTGGTGATATTGCCGAACTAGTAAAGTCTCTAGACTCTGTAAAATTGGAAGAGAACAAATCATCAGGTCAAGGACCAAAATCAACCCAAGCATCTACAAAGGCCTCTTCTTCCAACCTGCCTGCACAAAAGCCTGCTGCGTATCGCCCCCCACATGCTAAAGCTGCTGCTGCTATTCAGGCTGAGTTGTTGGGACAAAGCCCCTCTGAatcAATGAGCAAGAATGCActgagaaacaagaaaaagagggagaaacagaaaaaggcTGCTTCTGCTGAATG 1538 0.4122 MASNDLPPSLEILVRGPEEFSLWNGPPFINGQPGVKLDKVICVSANFNENGSKIMVMKSNSVISIYDCASKKEIRSFEVPNVAAGVLSPCGTYLQTFQKSSTPQEKNVTLWKIDTGDPVYQLFQKNLTKTTWPSIQFSSDETVACRLATNEVQFFDTGDFSKGVIYRIRVPGVAGIELSRTPGSHVAAFVPESKGGPASVQIFSCGKDSQSQPIARRSFFRCSTVQLRWNHGSTGLLVAAHSDVDKTNQSYYGESKLCYLTTDGSHEGLVPLRKEGPVHDSQWSYSGLEFAVVYGFMPAKATVFDKRCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYQEKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRRQVDNGIKIFHYNGSLYFKKMLEKLYQADWRPESPNKFGDIAELVKSLDSVKLEENKSSGQGPKSTQASTKASSSNLPAQKPAAYRPPHAKAAAAIQAELLGQSPSESMSKNALRNKKKREKQKKAASAE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02179 512 MobiDBLite consensus disorder prediction 436 462 - -
Bva09g02179 512 Gene3D - 36 190 IPR015943 GO:0005515
Bva09g02179 512 MobiDBLite consensus disorder prediction 436 512 - -
Bva09g02179 512 SUPERFAMILY DPP6 N-terminal domain-like 43 395 - -
Bva09g02179 512 Coils Coil 493 512 - -
Bva09g02179 512 Gene3D - 198 414 IPR015943 GO:0005515
Bva09g02179 512 PIRSF Transl_init_eIF2A 6 512 IPR011387 GO:0003743|GO:0006413
Bva09g02179 512 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 9 511 IPR011387 GO:0003743|GO:0006413
Bva09g02179 512 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02179 131 418 Eukaryotic Initiation Factors Gene Family AT5G27640 26.490 6.05e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02179 K15026 - gmx:100810278 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02179 09 17971792 17979133 Bva09g02179 09 17971792 17979133 ECH