Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02174 atgaaaattcagTGCGATGTGTGTGAGAAAGCTCCGGCAACGGTGATTTGTTGCGCGGATGAGGCAGCTTTATGTGCCAAATGCGACGTTGAAGTTCATGCTGCTAACAAGCTTGCCAGCAAGCACCAGAGGCTTCTCCTTCAATGCCTATCAAACAAGCTTCCCAGATGTGATATATGCCAAGATAAGGCGGCTTTCATATTCTGTGTTGAAGACAGAGCACTGTTTTGTCAAGATTGTGATGAACCAATTCATTCAGCTGGTAGCCTTTCTGCAAACCACCAGCGCTTTCTGGCCACAGGGATCCGTGTGGCATTGAATTCTAATTGTGCCAAAGACAATGATAAAACTCGGTTGGAGCCACCTAATAGAAATGCACAACAATTTGCTCCCAAAGTTCCTCCTCAGCAAGTTCCTAGCTTCTCACCATCTTGGGCTGTTGATGACTTGTTGGAATTAGCAGACTTTGAATCACCTGACAAAAAGGAATCCCTTGAATTTGGAGAGCTAGAATGGTTGGCAGACATGGGTCTTTTTGGTGAACAATTTGGTGAGGAAGCCTCAGCTGCTGCTGAAGTTCCTCAGCTTCCGGTGACACAAACCAGCAATGTTGCCTCCTACAGATCTTCAAAGTCCAACAATGCTTACAAGAAACCGAGGCTCGAAGTACTCGACGAAGATGATGAGGAGTACTTCACTGTGCCTGACCTTGGCTGAAGCACCTAGTCTGGGTTTCTTTACCCTTACTATATATCTATAAGATGATGACTTGTATATTCCTCTCCAaggataataatattattatgtacaCAAAGTTGTGTGTATGTTCATGTCACATTTAGGAGTTTCAATACTGAGGATAGCATAAAATGTATGCGTCTGCTTCTGGTGATCAAAATTTCTCCACTTAGATTGTATGCAGCGTAATTTTGGTTGACCTTGTACACCAATTTGTGCTGGtttgtattttcatttgtaCTTTGAACTGCTCTTGGTAATGAGTATATGTGCAGGAGGAACTTGTACTGTATATTTGCCG 1039 0.4187 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPRCDICQDKAAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVALNSNCAKDNDKTRLEPPNRNAQQFAPKVPPQQVPSFSPSWAVDDLLELADFESPDKKESLEFGELEWLADMGLFGEQFGEEASAAAEVPQLPVTQTSNVASYRSSKSNNAYKKPRLEVLDEDDEEYFTVPDLG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02174 238 CDD Bbox1_BBX-like 57 98 - -
Bva09g02174 238 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Bva09g02174 238 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bva09g02174 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bva09g02174 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bva09g02174 238 Gene3D Classic Zinc Finger 1 120 - -
Bva09g02174 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva09g02174 238 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 238 - -
Bva09g02174 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Bva09g02174 238 CDD Bbox1_BBX-like 5 47 - -
Bva09g02174 238 MobiDBLite consensus disorder prediction 203 222 - -
Bva09g02174 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02174 Bva-Chr9 17956239 17958759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02174 1 161 Orphan Transcription Factor Family AT1G06040 64.706 1.59e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bva09g02174 zf-B_box 4.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02174 - - gmx:100814727 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02174 09 17956239 17958759 Bva09g02174 09 17956239 17958759 ECH