Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02160 ATGCCTAAGCAAATCCATGAGATCAAAGATTTCCTTCTCACAGCTCGAAGGAAAGATGCACGTTCTGTGAAAATCAAGAGGAGCAAAGATGTGGTTAAGTTCAAGGTCCGTTGCTCCAAGTATCTCTACACCCTCTGTGTGTTTGACTCTGAGAAAGCTGATAAGTTGAAGCAATCCCTTCCTCCAGGTTTGAGCGTGCAAGATCTGTG 209 0.445 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02160 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Bva09g02160 69 PANTHER - 1 69 - -
Bva09g02160 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Bva09g02160 69 Gene3D - 1 69 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02160 Bva-Chr9 17860940 17862218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02160 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 95.652 2.09e-44 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02160 K02923 - cpap:110821218 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02160 09 17860940 17862218 Bva09g02160 09 17860940 17862218 ECH