Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02153 ATGGAATACCCTTTTTCTCCTAAGGGGAAAGGACTCGGGTATTGGACATCTCCTCGAACTCAGTTGGAGGGATCAACATCATTGGATGGTGgaataagaaattcaatttcagaGGACGTGCTTAACAACTTTTCAGAGCTCATGAGTTTTGATACTTATGCTGGCTGGTGCAACAGTCCCTCAGCAAATGAGCAGATTTTGGCTAATGGGTTTTCATCATTTGCACCATATGCTTCATCTGATGGATTCAATTCATTGGAACAAAGCAATGGAGCTTTCTTCATGACTGAAGGTAGTGGAAATTACAATACGATGGGAAGTTCCCCCAATACTGGGGAAAAAGTTGGATTTCAGCAAGTTGACACCCAACTTGGGTTCTCTGGTGATGCTAATGACGCTAATAACTTGAATTCTAGACAAAATAATGGATCtcttcaacaaattaatacTTTAGACATGGGAAATTATATAATCTCTAGGTCACCTGCATGGTCACTTGATGAGAGAATGCTGAGGGCTTTGTCCTTCTTCAAGGAATCCGCGGGTGGGGGAATATTGGCACAAGTTTGGGTACCCATAAAGCAGGGTGATCAGTTCATATTAAGCACAAGTGAGCAACCCTATTTACTAGACCAAATGCTTGCAGGGTACCGGGAAGTGTCAAGGCAATTTACATTCTCTGCAGAAGAAAAACCAGGTTCTGTCCCAGGACTTCCTGGTCGTGTGTTTATCTCCAAAGTTCCTGAGTGGACTTCCAATGTTCTTTATTACAGTAAGACTGAATATTTGAGGGTGGAGCATGCTATTGATCATGAGGTTCGTGGATCAATTGCTTTTCCAGTATTTGATCTTCACTCTGAAATGCCATGCTGTGCTGTATTGGAACTTGTCACTACGAAGGAACAATCTGATTTTGATAGAGAATTGGAAATTGTTTGTCAAGCCCTCCAgGCTGTGAATTTAAGGACTTCTATGCCTCCCCGACTTCTTCCCCAGTATGTCTCAAATAACAAACGAGCAGCTTTAACAGAGATAATTGATGTCTTACGAGCTGTGTGTCATGCACATAGATTGCCACTTGCATTGGCATGGATTCCCTGTTGGTACACAGAAGGAGTTGGTGATGAAATTAGAGGGATACGAATAAGAGAGAATAACTCAAATTCTAGTGAAAAAGGTGTACTCTGCATTGAAGAATCAGCATGCTATATAAATGATAGACTGATGGACGGATTTGTTCATGCATGTCTTGAACATCATCTTGAGCAAGGACAAGGTATAGCTGGGAAAGCTCTTCAATCAAATCACCCATTCTTCTGTCCTGATGTGAAGACATATGATATTAGTGAGTATCCACTTGTTCATCATGCACgcaaatacaatttaaatgcGGCAGTTGCAATCAGGCTTAGGAGTACCTTCACCAATGATGATGATTACATATTAGAGTTCTTTCTACCTGTCAATATGACAGGCAGTTCAGAACAGCAACTTTTATTAGACAACCTCTCAGGTACAATGCAGAGAATTTGTAAGAGCTTGAGGACAGTTTCAGATGTGGAATTATCAAGAAGAGAAGGCCAACAAGGAGGCTTCCGAAAAGAAAAAGCCCCAGGATTTTTGTCAATGTCTAGGAGCAACTCTCAAATAGCATTAACAGATGGTGACCACGATTCAATGAGGAAGATGTCTTCGAAGGCATCTAACCTGAGAAACAACGGAATTGACGATGCTGATAATCAGgtAACAAGTGGATCAAGAAGGCAGgctgagaaaaagagaaatacagCAGAAAAGAATGTCAGCTTGAGTGTACTCCAGCAATATTTTTCTGGTAGTCTAAAGGATGCTGCAAAGAGCATTGGTGTTTGTCCTACGACTCTAAAAAGGATATGTAGGCAACATGGCATTCCAAGATGGCCATCCCGCAAGATTAATAAAGTGAATCgttcattaaagaaaatacagaCTGTGCTTGACTCTGTTCAGGGGGTTGAAGGAGGGTTGAAGTTTGACCCCTCTACTGGGGGGTTTGTATCAGGTGGTTCAATCATCCAAGAGTATGATGCTCATAGAAGTCTTCTGTTCTCTGAGAAAAGTATGCCTGTAAAAGACCCTGTACTTGTTACACAAGATGTAGTTGTTGTAAATTCGGCACCTTGTTCTGAACGTGATAATTCAGTGATTAAGATGGAAGAAGATGATGCTTATTTAACTTATAGAAACCAGCTTTTGCACTCAAGAAGTGCAGTTACCCATAATTCATGTGAGGGAGAATTGAAGAGAATAAATGCTTCTTCTGTTGATTGTAGTGAAGATTCAAGGTCAATGGCCTGTCTGGGTTCTGTTCTTGCACAAGAAGGAGATAAATGGGTTCAGAAAAACGACAGTCTGGGATTAGAAAATGCAAACTCTGATGTCTCTGGGAGTTCAAGTTCCTTGATTGCTGGAGGGATTGAAAACAGTCTGGATGGAGACAATGGGATTGTTGATCATAGACATCCTACTTCTTCTAGCATGACAGACTCATCAAATGGCTCTGGTTCAACAATGCATGATAGTTCATCAGCCTCATTTGAGAACCAGAAGCATTCGAAGGTCAAATCAACCTCTCTCGATAGCGGGCCAAAAATTATTGTGAAAGCTACCTACAGGGAAGATACCATTCGTTTCAAGTTTGATCCGTCTGCAGGTTGTTTGCAGCTATATGAAGAAGTTGCCACAAGATTCAAGTTGCAAAATGGGTCATTCCAGCTCAAATATCTAGATGATGAAGAGGAATGGGTGATGTTAGTAAACGACTCAGATTTGCAAGAGTGTCTGGAAATATTGGATGAAATTGGCACACGTAGTGTGAAGTTCCTTGTTCGTGATTTGCCTTTTGTTCTGAGCAGCTCTGGTAGTAGCAGTTGCTCCTGTAGGCAGCTCATAGCATA 2936 0.4019 MEYPFSPKGKGLGYWTSPRTQLEGSTSLDGGIRNSISEDVLNNFSELMSFDTYAGWCNSPSANEQILANGFSSFAPYASSDGFNSLEQSNGAFFMTEGSGNYNTMGSSPNTGEKVGFQQVDTQLGFSGDANDANNLNSRQNNGSLQQINTLDMGNYIISRSPAWSLDERMLRALSFFKESAGGGILAQVWVPIKQGDQFILSTSEQPYLLDQMLAGYREVSRQFTFSAEEKPGSVPGLPGRVFISKVPEWTSNVLYYSKTEYLRVEHAIDHEVRGSIAFPVFDLHSEMPCCAVLELVTTKEQSDFDRELEIVCQALQAVNLRTSMPPRLLPQYVSNNKRAALTEIIDVLRAVCHAHRLPLALAWIPCWYTEGVGDEIRGIRIRENNSNSSEKGVLCIEESACYINDRLMDGFVHACLEHHLEQGQGIAGKALQSNHPFFCPDVKTYDISEYPLVHHARKYNLNAAVAIRLRSTFTNDDDYILEFFLPVNMTGSSEQQLLLDNLSGTMQRICKSLRTVSDVELSRREGQQGGFRKEKAPGFLSMSRSNSQIALTDGDHDSMRKMSSKASNLRNNGIDDADNQVTSGSRRQAEKKRNTAEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGIPRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPSTGGFVSGGSIIQEYDAHRSLLFSEKSMPVKDPVLVTQDVVVVNSAPCSERDNSVIKMEEDDAYLTYRNQLLHSRSAVTHNSCEGELKRINASSVDCSEDSRSMACLGSVLAQEGDKWVQKNDSLGLENANSDVSGSSSSLIAGGIENSLDGDNGIVDHRHPTSSSMTDSSNGSGSTMHDSSSASFENQKHSKVKSTSLDSGPKIIVKATYREDTIRFKFDPSAGCLQLYEEVATRFKLQNGSFQLKYLDDEEEWVMLVNDSDLQECLEILDEIGTRSVKFLVRDLPFVLSSSGSSSCSCRQLIA 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02153 978 MobiDBLite consensus disorder prediction 832 870 - -
Bva09g02153 978 ProSiteProfiles PB1 domain profile. 877 959 IPR000270 GO:0005515
Bva09g02153 978 CDD PB1_NLP 878 958 IPR034891 -
Bva09g02153 978 ProSiteProfiles RWP-RK domain profile. 582 668 IPR003035 -
Bva09g02153 978 MobiDBLite consensus disorder prediction 824 870 - -
Bva09g02153 978 SUPERFAMILY CAD & PB1 domains 870 959 - -
Bva09g02153 978 MobiDBLite consensus disorder prediction 551 598 - -
Bva09g02153 978 SMART PB1_new 877 959 IPR000270 GO:0005515
Bva09g02153 978 Pfam RWP-RK domain 600 648 IPR003035 -
Bva09g02153 978 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 972 - -
Bva09g02153 978 Pfam PB1 domain 880 958 IPR000270 GO:0005515
Bva09g02153 978 Gene3D - 874 957 - -
Bva09g02153 978 PANTHER PROTEIN NLP8 5 972 IPR045012 GO:0003700
Bva09g02153 978 MobiDBLite consensus disorder prediction 565 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02153 Bva-Chr9 17791716 17799177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02153 1 969 NLP Transcription Factor Family AT2G43500 51.316 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva09g02153 PB1 9.9e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02153 - - aprc:113864503 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g02153 09 17791716 17799177 Bva09g02153 09 17791716 17799177 ECH