Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02134 ATGCCATTGCAGACAGAGAAGCTGATTTTCGAGAGTGTTTTACAAAACAATGGTGGAAAAATACCCACAAGAGGTCTTATTAGTATTGTCTCTAACAGGAGTAATGGCAAACctgatgagaaagaaaagtggTGTCTCAAGAGTTGTGACAAAAAGCCAAGTAACAAGTtgagcaaaaggaaaaagtttatAGATAAGGCTAGGACATGTAAATTCGTTACATTTATGTGTTTTAGACGGTTTCGAGTTCCCCATTTGAAGAATCCCTGCTTCAACACAGAGGGCATTCATCGGGTGAGGATGATGATGGATCATCAATCTGATCAGGCCTTTCATTCAGATGAAAGTGACCTTGATATGCAAGTACAAGTTAGTGACAAGAAAGAGGAAATAGAAGATCTGCTTCCTGATAACCTGGAACTATGTGGAgttgaagatgaaaaatttgTAGAACAACCGGTTGGAAATATTTCAGCCAATGAAGAAGGTTTAGAGCCATATGTAGACATGGAGTTTAGTTCAAGAGATGAAGCCAGAGAATTTTACATTGCCTATGGAAGGCGGATTGGTTTCACTGTACGAATACACCATAATCGTCGTTCACGAGTAAACAATCAGGTTATAGGTCAAGATTTTGTCTGCTCAAAAGAAGGATTTCGTGCAAAGAAGTATGTATACAGAAAAGATAGAGTTCTTCCTCCTCCACCAGTCACCAGAGAAGGCTGTCAAGCCATGATAAGGTTGGCTTTACGAGATGGAGGGAAATGGGTGGTTACCAAATTTGTGAAAGAGCACAGTCATAAACTGATGAGTCCTAGCAAGGTTCCATGGCGGGGATCTGGAAAGCACTTGGTTAGTGAGGATGAGAAAGATAAGAGAATCCGTGAGCTATCTCTTGAGCTGTATAATGAAAGGCAAAAGTGCAAGCGACGGTGTGCTGCATATGAAGAACAGTTAAATATGATTCTGAACGATTTGGAAAAACACACAGAACACATCTCAAAAAAAGTTGCAGATATAGTGCAAAGTATGAGAGAGATTGAGGAGGAGAAATCAGATTCAGATTGTGGATA 1073 0.3812 MPLQTEKLIFESVLQNNGGKIPTRGLISIVSNRSNGKPDEKEKWCLKSCDKKPSNKLSKRKKFIDKARTCKFVTFMCFRRFRVPHLKNPCFNTEGIHRVRMMMDHQSDQAFHSDESDLDMQVQVSDKKEEIEDLLPDNLELCGVEDEKFVEQPVGNISANEEGLEPYVDMEFSSRDEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVYRKDRVLPPPPVTREGCQAMIRLALRDGGKWVVTKFVKEHSHKLMSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISKKVADIVQSMREIEEEKSDSDCG 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02134 357 Pfam FAR1 DNA-binding domain 180 270 IPR004330 -
Bva09g02134 357 Coils Coil 305 332 - -
Bva09g02134 357 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 103 355 - -
Bva09g02134 357 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 103 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02134 Bva-Chr9 17699505 17705546 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva09g02134 FAR1 4.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02134 - - gmx:100810283 435.261