Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02130 ATGGGGCATAgttcaaagaagaagaagcgtGGAGGAGGGAGTGGGAGGAGGAATAAGGGACGAGCAACTTTGAAAGATCATGTGTCTCATTCTGGTGGCGATGATAACGAGCTTTCAGAGGAGATCACTGCCGTATGTGCAATTTTCCAAGAGGACTGCAAGATTCTTCCTGGATCACCtcctcaaataattattaggCTCAGGCCTTACTCAAAGGATATGGGTTATGAGGATGTAGATATTTCTGCTTTTCTTACTATCCGGTGCTTACCTGGCTATCCTTTCAAGTGTCCAAAGTTGCAGATTACTGCTGAGAATGGTTTATCAGACAGTGATGCTGATAAACTTTCGTCTGTCCTCCATGATCAGGCTAATTTAAATGCTAGGGAGGGACGAGTAATGATCTTTAATTTGGTCGAGGCTGCTCAAGAATTTCTTTCTGAAATTGAGCCAGTTGGCAAGTCACATGAATCTAAGCTTTTGCGCTCAACTATAGAAAGCAACGAAGAATTCCTTCTCCAGGATATGGTAACTTCAAATAGGAGTAGCTCTTTTGTTTATGGCTTCATAGACCTCTTCAGTGGTTATGGAGAATCATGGAACTGGGGTTTTGGAATGGAGGAAACTGGTGGgaaaatttcttctatttcacCCTCTACGTTAGATGCCTCAAAACGTGGTTATGAGGCTCAGGGAAAGAAATCTGATTCAAAGGTTGAGCCATTAATTATGGAAGAAAGTAAGAAAGGTCCACTAGTTTCTCATACATCCAAATTAGATACCTTGGTAGAAGACACTGAAGACAGTAACAAGAGTGTGTCTTCTGCTTATTCAAGTAGATCTCATGCAGAGGATTTCACAGGGAACAACAATGAAGGTGAGCAAGAGgATTTTATCCTTGATGAGTATGCTATAGAAGATAATGAAGGTATATATGGAAGTGAGTCTTCAAAGTCTGAGTCTTCTGCCTCCTTGGTTACTAATCAAGCAACTCAAACAGTTGAAAAGGATCTAATAATGGTTCACTTGCTTCGCCTTGCTTGTGGTTCAAAAGGACCATTTGCTGACACTTTGTCACAAATAGCCACAGAGCTCAACAGTTTAGggATCTTTTCTGATTGGGCACAAGATATAGCATCTAAACCACCTTCCCTTTTTCACAAAACCTTTGATCATGTTTTCAAGAAACAAATGGTTTCATCCAGAATACCTCAATTTTGGAAACCTCCTTCAGATCTTGGAGGCTCGAATGCAGTTTCCCCAAATTCTCGATATCTGGATGACTTTGAGGAGCTAAGGCCCCTTGGTCATGGTGGTTTTGGCATTGTTGTGCTTTGCAAAAATAAGCTTGATGGAAGGCAGTATGCAGTGAAGAAAATCCGCCTTAAAGACAAAAGTATCTCTGTTAACGATAGAATATTAAgGGAAGTAGCCACACTATCTCGTCTGCAGCATCAACATGTTGTTCGGTATTATCAGGCATGGATTGAAACTGGACTTGTTGAGTCTGATGATTCTACTTGGGGTTCAAGGACTCCAATAAGCTCCACTTTCAGCTATAAAGCTCCAAGCTCCACAGATGCCTTTGGACATGAGAATCAGCTTGAATCAATCTACCTTTACATTCAAATGGAGTACTGCCCCAGGACACTCGGCCAAGTATTTGAATCGTATACTCATTTTGACAAAGAATTAGCATGGCATTTGTTTCGTCAAATTGTGGAAGGCTTGGCACACATACATGGACAAGGAATAATTCATCGGGACTTGACaccaaataacatattttttgatGCTCGCAATGACATTAAAATTGGTGATTTTGGTCTTGccAAGTTTTTGAAGTTGGAGCAGTTGGATCAAGATCCAAGTCATCCTGCCGATACAGCTGGAATTTCCATTGATGGTACTGGACAAGTTGGAACCTATTTCTATACAGCACCAGAAATTGAACAAGGATGGCCTAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAACTTTGGCACCCATTTGGGACAGCAATGGAGAGACACATTGTTTTATCTGATTTGAAACAGAAAGGAGAACTTCCCCTTGCTTGGGTCACCGAGTTTCCAGAACAGGCTTCTTTGCTGCGGCACTTAATGTCTTCAAGTCCATCTGAACGTCCTTCTGCTACTGAACTTCTGCAAAATGCATTTCCACCACGAATGGAATTTGAGTTATTAGATGACATTCTTCGAACAATGCAGACATCAGAAGATACAAGCTTGTATGATAAAGTTGTAAATGCTATCTTTGATGAAGAGATATTAAGCACAAAAGAACACCTCCATCGGGCTGGTAGATTGGGGACAGTTGGAGGCAGCCGTTCATCCATACAGTACTCAGATTTAGAAACTGAGGTTCGTGATTACGTTGTTGATGTCACCAGGGGAGTCTTCAGGCAGCATTGTGCAAAGCACCTAGAAATATTACCGATGCGATTGTTGGATGATTGTCCACATTTTAATAGAAATGCAGTTAAACTTTTAACCCATGGAGGGGACATGCTTGAACTTTGTTATGAGCTGCGTTTGCCTTTTGTAAACTGGGTTATAACTAAACAGAAATCTTCATTCAAAAGATATGAGATATCAAGTGTCTATAGAAGAGCAGTTGGACATTCAACACCAAACCACTACCTCCAgGGTGATTTCGACATTATTGGTGGAACCTCAGTATTGACAGAGGCAGAGGTCATAAAGGTGACAAGGGATatattcactttatttttccattCAGACTCATGTGATATTCATCTAAACCATGGCGACCTACTGGATGCAATTTGGTCGTGGATAGGAGTAAAGGCAGAATACAGGCTTAAAGTAGCAGAGCTTCTTTCAATGATGGGTTACCTGCGTCCAGAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGACAGCTTTTGCAGGAACTGAAGTTAGCAGAAGCTATTGTCAATAGGTTGCAGACAGTAGCTTTAAGATTCTCTGGAGATGCAGATCACGCACTTCCCAGATTAAGAGGAGCCTTGCCATCGGATAAACGTACTCGCAAGGCAGTCGATGAATTGTCTGAGCTATTCAGTCTTTTAAGAGTTTGGAGGATTGACAAAAACGTTTATATAGATCCACTAATGCCACCAACAGAAATTTAtcatagaaatatattttttcagGTATACTTAACGAAAGAGAGCAATCCTGGACCACTTTCTGAAGGTCCCTTGCTGGCTGTTGGTGGTCGGTATGACTATTTACTTCAACAGATGTGGAGCCGTGACTATAAAGCAAATCCTCCTGGCGGTGTTGGGGTTAGCCTTGCCCTGGAgacaataattcaaaattgtcCTATAGATTTTAAGCCCATTCGAAATGAAGCGAGTGCCAGTATTCTTGTTTGTTCAAGAGGTGGAGGTGGTCTGTTGGAGGAGCGCATGGAACTAGTTGCTGAATTATGGGAGAACTTTAAGGCTGACTTTGTCCCCAACCCTGATCCAAGTCTTACAGAACAGTATGAATATGCCAACGAGCATGATATTAAATGTCTTGTCATCATCACTGATGCAGGTGTCTCTCAGACAGGTTCTGTTAAGGTTCGGCATCTTGAGCTtaagaaggagaaggaagtTGAGAGAGAAAATCTGGTTAAGTTTCTATCAGATGCAATGGCAACACAATTTAGAAACCCCTCTATTTGGAATTG 3734 0.3998 MGHSSKKKKRGGGSGRRNKGRATLKDHVSHSGGDDNELSEEITAVCAIFQEDCKILPGSPPQIIIRLRPYSKDMGYEDVDISAFLTIRCLPGYPFKCPKLQITAENGLSDSDADKLSSVLHDQANLNAREGRVMIFNLVEAAQEFLSEIEPVGKSHESKLLRSTIESNEEFLLQDMVTSNRSSSFVYGFIDLFSGYGESWNWGFGMEETGGKISSISPSTLDASKRGYEAQGKKSDSKVEPLIMEESKKGPLVSHTSKLDTLVEDTEDSNKSVSSAYSSRSHAEDFTGNNNEGEQEDFILDEYAIEDNEGIYGSESSKSESSASLVTNQATQTVEKDLIMVHLLRLACGSKGPFADTLSQIATELNSLGIFSDWAQDIASKPPSLFHKTFDHVFKKQMVSSRIPQFWKPPSDLGGSNAVSPNSRYLDDFEELRPLGHGGFGIVVLCKNKLDGRQYAVKKIRLKDKSISVNDRILREVATLSRLQHQHVVRYYQAWIETGLVESDDSTWGSRTPISSTFSYKAPSSTDAFGHENQLESIYLYIQMEYCPRTLGQVFESYTHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDPSHPADTAGISIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHIVLSDLKQKGELPLAWVTEFPEQASLLRHLMSSSPSERPSATELLQNAFPPRMEFELLDDILRTMQTSEDTSLYDKVVNAIFDEEILSTKEHLHRAGRLGTVGGSRSSIQYSDLETEVRDYVVDVTRGVFRQHCAKHLEILPMRLLDDCPHFNRNAVKLLTHGGDMLELCYELRLPFVNWVITKQKSSFKRYEISSVYRRAVGHSTPNHYLQGDFDIIGGTSVLTEAEVIKVTRDIFTLFFHSDSCDIHLNHGDLLDAIWSWIGVKAEYRLKVAELLSMMGYLRPESSERKSKWVVIRRQLLQELKLAEAIVNRLQTVALRFSGDADHALPRLRGALPSDKRTRKAVDELSELFSLLRVWRIDKNVYIDPLMPPTEIYHRNIFFQVYLTKESNPGPLSEGPLLAVGGRYDYLLQQMWSRDYKANPPGGVGVSLALETIIQNCPIDFKPIRNEASASILVCSRGGGGLLEERMELVAELWENFKADFVPNPDPSLTEQYEYANEHDIKCLVIITDAGVSQTGSVKVRHLELKKEKEVERENLVKFLSDAMATQFRNPSIWN 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02130 1244 Coils Coil 982 1002 - -
Bva09g02130 1244 MobiDBLite consensus disorder prediction 268 293 - -
Bva09g02130 1244 Pfam Protein kinase domain 429 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02130 1244 ProSitePatterns Tyrosine protein kinases specific active-site signature. 585 597 IPR008266 GO:0004672|GO:0006468
Bva09g02130 1244 SMART RWD2001b 40 149 IPR006575 GO:0005515
Bva09g02130 1244 Gene3D - 1136 1234 IPR036621 -
Bva09g02130 1244 MobiDBLite consensus disorder prediction 19 36 - -
Bva09g02130 1244 SUPERFAMILY UBC-like 36 146 IPR016135 -
Bva09g02130 1244 Gene3D Phosphorylase Kinase; domain 1 417 546 - -
Bva09g02130 1244 Gene3D Transferase(Phosphotransferase) domain 1 551 741 - -
Bva09g02130 1244 Gene3D Ubiquitin Conjugating Enzyme 28 157 IPR016135 -
Bva09g02130 1244 SUPERFAMILY Protein kinase-like (PK-like) 425 754 IPR011009 -
Bva09g02130 1244 CDD STKc_EIF2AK4_GCN2_rpt2 423 730 - -
Bva09g02130 1244 SUPERFAMILY Class II aaRS ABD-related 1136 1234 - -
Bva09g02130 1244 Gene3D Bira Bifunctional Protein; Domain 2 783 1127 IPR045864 -
Bva09g02130 1244 MobiDBLite consensus disorder prediction 1 36 - -
Bva09g02130 1244 ProSitePatterns Protein kinases ATP-binding region signature. 435 459 IPR017441 GO:0005524
Bva09g02130 1244 SUPERFAMILY Class II aaRS and biotin synthetases 795 1123 IPR045864 -
Bva09g02130 1244 PANTHER EIF-2-ALPHA KINASE GCN2 21 1244 - -
Bva09g02130 1244 MobiDBLite consensus disorder prediction 227 245 - -
Bva09g02130 1244 Pfam RWD domain 37 146 IPR006575 GO:0005515
Bva09g02130 1244 Pfam Histidyl-tRNA synthetase 884 1122 IPR041715 -
Bva09g02130 1244 ProSiteProfiles Protein kinase domain profile. 429 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02130 1244 MobiDBLite consensus disorder prediction 1 16 - -
Bva09g02130 1244 MobiDBLite consensus disorder prediction 224 293 - -
Bva09g02130 1244 ProSiteProfiles RWD domain profile. 40 149 IPR006575 GO:0005515
Bva09g02130 1244 PANTHER HISTIDYL-TRNA SYNTHETASE 21 1244 - -
Bva09g02130 1244 Pfam Anticodon binding domain of tRNAs 1141 1236 IPR024435 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02130 Bva-Chr9 17638270 17669543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02130 419 733 MAP Kinase Kinase Kinase AT1G63700 26.074 7.13e-21 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Bva09g02130 Pkinase 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02130 K16196 - gmx:100797996 1878.99