Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02120 ATGGGAAGCTGCATATCGACGCCGGCCAAAGTATTACATAGGAAAAAGTTCAAAGGGGTGCAGAAGCCATCAACGCCGAGAAGCGGGGAGCATGAAGGCTCGGTGAAAGCGCGAAAATGGGTGTCAGGAAGAGGAATCAACGTGGTGGAGAAGCCGTCGCCGGGGAGCATATTTGATAAGTATCGATTGGGAAAGGAATTGGGAAGAGGAGAGTTCGGGGTAACGCATCGATGCGTGGAGATAGAGAGTGGGAAGGAATTCGCGTGCAAGAAAATATCGAAATCGAAGCTGAGAACGGAGATTGATGTTCAAGATGTGAGGAGAGAAGTGCAGATCATGAGACATTTGCCTAGACATCCCAACATTGTCACTTTCAAGGAGGCGTACGAGGATAAGGATGCTGTTTATCTTGTCATGGAGCTCTGTGAAGGTGGTGAATTATTTGATAGAATCGTCGCTAAAGGCCATTACACCGAGCGTGCTGCTGCCAATATAACCAAGACCATTCTCGAGGTTTGCAAGGTTTGCCATGATCACGGGGTGATTCATAGGGACTTAAAACCTGAGAATTTCTTGTATGCAGATTCAAGCGAGAATTCTGCATTAAAGACAattgattttggtctttccacTTTCTATGAAAAAGGCCAGAGATTTAGTGAAATTGTTGGAAGCCCCTATTACATGGCTCCAGAGGTATTGAGACGCAACTATGGACCAGAAATTGATGTCTGGAGCACAGGCGTAatcctttatattttactttgtgGAGTTCCACCCTTTTGGGCAGAAACTGAGGAAGGAATTGCACAGGCGATCATTCGGGGTAACTTGGATTTTCAAAGAGATCCTTGGCCAAAGGTTTCTGAGGAAGCAAAAGATCTAGTTAAGAATATGCTTGATCCAAATCCATACACCCGACTAACGGTTCAAGAAGTCCTTGAACATTCCTGGATACAAAACAAGGATCATGGTCGGAATATTTCACTTGGAGACCACGTTGGAATGAGGATCAAGCAATTCTCATTGATGAACAAGTTCAAGAAGAAAGTTCTCAGaGTGGTGGCAGATAATCTACCAGATGAGCAAGTAGATGGAATCAAGCAAATGTTCCATATGATGGACAAGgataaaaatggaaacttgTCATTTGAAGAGCTCAGAGATGGCCTTTCTATGTTTGGACACACTCTTCCTGATCTTGATGTGCAGATGCTACTGGACGCTGCAGATATTGATGGAAACGGCACACTCAATTGTGAAGAGTTCATCACAATGAATGTTCATTTGCGAAAAATCGGTAGTGACGAAAATCTATCAGAAGCTTTCCAGTACTTTGACAAGAATCGGAGTGGATATATTGAGTTTGAGGAGTTGAGAGAGGCCTTGTTGGATGACGACTCCCTTCAAAATAATGACCAGGTCATCAAGGACATCCTATCTGATGTCGACTTGGATAAGGATGGTCTAATCAGTTTTGAGGAGTTTAAGGCAATGATGAAGACAGGAGCAGATTGGAAAATGGCTTCTCGTCAGTATTCTAGAGCACTGCTAAATGCATTGAGCTTCAAGCTGTTCAAAGACCAATCCGTTAAAGTTAACTA 1604 0.4233 MGSCISTPAKVLHRKKFKGVQKPSTPRSGEHEGSVKARKWVSGRGINVVEKPSPGSIFDKYRLGKELGRGEFGVTHRCVEIESGKEFACKKISKSKLRTEIDVQDVRREVQIMRHLPRHPNIVTFKEAYEDKDAVYLVMELCEGGELFDRIVAKGHYTERAAANITKTILEVCKVCHDHGVIHRDLKPENFLYADSSENSALKTIDFGLSTFYEKGQRFSEIVGSPYYMAPEVLRRNYGPEIDVWSTGVILYILLCGVPPFWAETEEGIAQAIIRGNLDFQRDPWPKVSEEAKDLVKNMLDPNPYTRLTVQEVLEHSWIQNKDHGRNISLGDHVGMRIKQFSLMNKFKKKVLRVVADNLPDEQVDGIKQMFHMMDKDKNGNLSFEELRDGLSMFGHTLPDLDVQMLLDAADIDGNGTLNCEEFITMNVHLRKIGSDENLSEAFQYFDKNRSGYIEFEELREALLDDDSLQNNDQVIKDILSDVDLDKDGLISFEEFKAMMKTGADWKMASRQYSRALLNALSFKLFKDQSVKVN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02120 534 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Bva09g02120 534 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
Bva09g02120 534 Pfam Protein kinase domain 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02120 534 CDD STKc_CAMK 60 318 - -
Bva09g02120 534 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Bva09g02120 534 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Bva09g02120 534 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Bva09g02120 534 Pfam EF-hand domain pair 379 426 IPR002048 GO:0005509
Bva09g02120 534 SUPERFAMILY Protein kinase-like (PK-like) 57 324 IPR011009 -
Bva09g02120 534 Gene3D - 360 428 - -
Bva09g02120 534 Pfam EF-hand domain pair 437 501 IPR002048 GO:0005509
Bva09g02120 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Bva09g02120 534 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 516 - -
Bva09g02120 534 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Bva09g02120 534 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
Bva09g02120 534 SMART efh_1 438 466 IPR002048 GO:0005509
Bva09g02120 534 SMART efh_1 366 394 IPR002048 GO:0005509
Bva09g02120 534 SMART efh_1 475 503 IPR002048 GO:0005509
Bva09g02120 534 SMART efh_1 402 430 IPR002048 GO:0005509
Bva09g02120 534 SMART serkin_6 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02120 534 ProSiteProfiles Protein kinase domain profile. 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02120 534 SUPERFAMILY EF-hand 348 513 IPR011992 -
Bva09g02120 534 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 24 41 516 - -
Bva09g02120 534 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Bva09g02120 534 Gene3D Transferase(Phosphotransferase) domain 1 147 329 - -
Bva09g02120 534 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Bva09g02120 534 Gene3D Phosphorylase Kinase; domain 1 63 146 - -
Bva09g02120 534 Gene3D - 337 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02120 Bva-Chr9 17584003 17586985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02120 1 528 EF-hand Containing Proteins AT2G31500 67.039 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva09g02120 Pkinase 2.9e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02120 K13412 - gmx:100818929 873.618