Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02099 ATGGAAATGCTTTCTGGCAATAGCAGCAAGCACGGTGCTGCCCCTTCTTCCTATCGCGGCGTACGCAAGAGGAAATGGGGCAAATGGGTTTCTGAAATCCGTGAGCCCGGAAAGAAGACCAGAATCTGGTTAGGAAGCTTTGAGACGCCGGAGATGGCAGCCGCCGCCTATGATGTGGCCGCGTTGAATTTCCGGGGACGTGATGCGAGGCTTAACTTCCCTGAACTGGCCTCCAGCCTTCCCCGTCCGGCAAGCAACAATGCCGACGACATACGCATGGCGGCTCACGAGGCTGCTTTGAGGCTTAGGACTAACAATACGCGTGCGGCGGAGGGTGGAGAGGCTTCTGGGTCGAACGCGGCTCCGGTCACCGTGAGGCTGTCGCCGAGCCAAATTCAGGCCATCAATGAGTCACCGCTGGACTCGCCCAAGATGTGGATGCAAATGGCAGAAGTGGACATGCTTTTGTACGAGAACGAGTCCATGATGTTGGGCAATGAGTTTGAGGAGAATGATCAATGGGAGGATATGCACAGTGATTCTCTCTGGgaccctta 557 0.5494 MEMLSGNSSKHGAAPSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAALNFRGRDARLNFPELASSLPRPASNNADDIRMAAHEAALRLRTNNTRAAEGGEASGSNAAPVTVRLSPSQIQAINESPLDSPKMWMQMAEVDMLLYENESMMLGNEFEENDQWEDMHSDSLWDP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02099 185 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Bva09g02099 185 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Bva09g02099 185 CDD AP2 16 76 IPR001471 GO:0003700|GO:0006355
Bva09g02099 185 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Bva09g02099 185 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Bva09g02099 185 Gene3D AP2/ERF domain 17 75 IPR036955 GO:0003700|GO:0006355
Bva09g02099 185 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Bva09g02099 185 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Bva09g02099 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 184 - -
Bva09g02099 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021 9 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02099 Bva-Chr9 17365233 17366351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02099 5 185 AP2-EREBP Transcription Factor Family AT1G71450 60.753 8.35e-69 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva09g02099 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02099 - - pvy:116106588 269.24