Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02098 atgaaagatgCTAGTTCTGCTGTGCCATCATCTGGCGTCAGGATAACACCCATTGATGATTTTAATGCTGATGCATCATCACCGACATCTGGGTCGAAATCGATATCAACAAACAATCCCAAGAGGAAGGAATCTGTGGAAACCATTGAAGGAGAAAGATCTGTTCCAAAGAAGCCTAGGATGGTTTGGACAAATGAACTTCACAATCGGTTTTTGAGGGCCATAAGACAAGTTGGACAAGACAGGGCTAGTCCTAAGAAGATTTATGAGATCATGAAGGTGCCAGGCTTGACCAGAAAACATGTTGCTAGTCATTTGCAgAAGTATCGCCTCTTCTTGAAGAAAGTTGATGAGCTCCTATCTCTTGAGGGAGCACCTGGTGGAAACATCTTGTCCTCAAAGCTTGCTAAGGGCCTTTCTGATGAGGTGATCAAAGAGATCCAAAAGAGAATAGAACTAATTAGACAATTATCAGGATCAAGAACTACAACTCTTAATCCTTCCAATACAAGCCAAATTGTTCTTCATACTTCAAGCAATGCCTCTATCGCTCAAGTTCTATCTACCCAATTGTCCAATCCTTCATCTCAAGGGGTAAGCTTTCAGAATCAGCATCAAGATCCACGAGGTAACTACTTGAGACTTGCTGGGCAATCACTGTTTGCGAGCAAAATTCCTGCTAATAGTTTCCAGAAACCAATTTTGGGTGGTTTTCCAAGTCTTCCCTATTATCCGTACAATGGAGGTTCAAACTTTTCATCATATAGTGGAAGCATAGGATCATATGACTCCATTAATGCTGCAAATGCTGGGTTGATAGATGTTAATCATGGAGGATTTGCTGCGGTTGATAGTTCAGAAGTGTTTTCACCGGTATTTTCTTCTAATACTACTCAACAAGAAAATTTCTCATCCTTGCCTCCATCGTGTCCACACCTTGGAGATCCTGGAAATGCTGCAGATCAGTCTCAATCTACTTCCAATACCTCAGGCGACTCGCAGCCGAATCAATTCGATAAGGAGCTCACtgagcttttctttttgatggaCAGCATATCTATTATTGATGAGCCTCAGGAACCTAGTAACGTGATTGTTCCTCCAAATGAAACCATCGTGAACCTACCAAACGAGCTGTTAACTCCCCCTAATGAAAACCCTAACCAGTTGAAAGGTGGCAATGAATCCACGGACTCCGATGCTGTTGGCAAGTACATGGTGGAGGATGCTATCCAACCATCCAACTATGCTAATTATAATGATCAGGCAAGTCATCTAGTTAAGTTAGACTTATCCTTCATGATGATGGGTTCAATGACTTG 1322 0.4115 MKDASSAVPSSGVRITPIDDFNADASSPTSGSKSISTNNPKRKESVETIEGERSVPKKPRMVWTNELHNRFLRAIRQVGQDRASPKKIYEIMKVPGLTRKHVASHLQKYRLFLKKVDELLSLEGAPGGNILSSKLAKGLSDEVIKEIQKRIELIRQLSGSRTTTLNPSNTSQIVLHTSSNASIAQVLSTQLSNPSSQGVSFQNQHQDPRGNYLRLAGQSLFASKIPANSFQKPILGGFPSLPYYPYNGGSNFSSYSGSIGSYDSINAANAGLIDVNHGGFAAVDSSEVFSPVFSSNTTQQENFSSLPPSCPHLGDPGNAADQSQSTSNTSGDSQPNQFDKELTELFFLMDSISIIDEPQEPSNVIVPPNETIVNLPNELLTPPNENPNQLKGGNESTDSDAVGKYMVEDAIQPSNYANYNDQASHLVKLDLSFMMMGSMT 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02098 440 MobiDBLite consensus disorder prediction 318 337 - -
Bva09g02098 440 MobiDBLite consensus disorder prediction 1 57 - -
Bva09g02098 440 Gene3D - 55 117 - -
Bva09g02098 440 MobiDBLite consensus disorder prediction 298 337 - -
Bva09g02098 440 MobiDBLite consensus disorder prediction 43 57 - -
Bva09g02098 440 Pfam Myb-like DNA-binding domain 60 110 IPR001005 -
Bva09g02098 440 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 33 338 IPR044841 GO:0003700|GO:0006355
Bva09g02098 440 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 112 IPR006447 GO:0003677
Bva09g02098 440 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 114 IPR017930 -
Bva09g02098 440 MobiDBLite consensus disorder prediction 22 42 - -
Bva09g02098 440 SUPERFAMILY Homeodomain-like 56 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02098 Bva-Chr9 17350578 17353231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02098 57 118 Response Regulator Gene Family AT5G58080 62.903 6.58e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva09g02098 Myb_DNA-binding 5.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02098 - K14491 gmx:102662017 123.25