Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02087 ATGATTACTCCTCAGTCAATGTTTATCTTCGCCTTCGCCGGAGAGGGTGCTTCCAGCACCATTCGTGGTGCTATTTCAATCATTATAGTTATCACAACTGTTATTGGCACTATATTTGCAGTTTCTAGGTTCATTAAAAAGTGTCAATCTTGTTTTGAAGATGATCAACCATATATGGAGGATGAACATCTGTTCTTAATGGTGGGGACTATAAGCAGAGATCATGTCCTCGGCCAGCAATGTGGAGTATGCTCGCTAGGGTTTTGGGATGCCAATGAAGTGGTTGTTTGGCGAATCTGTCGCCATAAATTCCATGTTGGTTGCATAATTGAATGGTACAAAGCAAATACAACTTGTCCAAAGTGTTTCTGTCGTGAAAGCTTGTACACTGCAGTCTTCCACATTCGCGATGAAACATATGCTGCTCTAGGGGTTAAAGGAAATTA 446 0.4126 MITPQSMFIFAFAGEGASSTIRGAISIIIVITTVIGTIFAVSRFIKKCQSCFEDDQPYMEDEHLFLMVGTISRDHVLGQQCGVCSLGFWDANEVVVWRICRHKFHVGCIIEWYKANTTCPKCFCRESLYTAVFHIRDETYAALGVKGN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02087 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 128 IPR013083 -
Bva09g02087 148 Pfam Ring finger domain 80 122 IPR001841 -
Bva09g02087 148 SUPERFAMILY RING/U-box 80 127 - -
Bva09g02087 148 ProSiteProfiles Zinc finger RING-type profile. 81 122 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02087 Bva-Chr9 17210612 17211058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02087 81 124 C3H Transcription Factor Family AT5G41430 40.909 2.81e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02087 - K10664 itr:116005641 55.4546