Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02079 atGAGTCACAGCTCGAGCGAGAATGAAGGAAGCTCGAGTGAGAAAAAATACATGGGAGTTCGTCGTCGGAAATGGGGTAAATGGGTATCGGAGATTCGTGTTCCGGGCACTCAAGAGCGTCTCTGGTTAGGTACCTATGCGACTCCGGAAGCTGCAGCGGTGGCTCACGACGTAGCATTCTTCTGTCTGAGGAGACCACAAACATTGGACAAGCTCAATTTTCCAGACATGTTGTCGTCTTATGTTGTTCAGAATCAGAAAGCTGTGTCGCCGAGGTCTGTACAGAAGGCGGCATCGGATGCTGGCATGGCCGTTGATGCTAACAACGTTATGAGAATCACAGGGAACAGAGAATCTTCTGTTGAGATGAAGCAGGAAATTGATGGATACAGCAGTGAATACAATCATGGGCAAGATCAGAACGATGGGTTTTGGTGGGAAAACTTGGGTAATGATGACGGTACAACGGCATGGGAAGATCATGGGGAAATTTTGACCCTTTCCATTGACGATTATCTGTGTATGTA 527 0.4744 MSHSSSENEGSSSEKKYMGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAFFCLRRPQTLDKLNFPDMLSSYVVQNQKAVSPRSVQKAASDAGMAVDANNVMRITGNRESSVEMKQEIDGYSSEYNHGQDQNDGFWWENLGNDDGTTAWEDHGEILTLSIDDYLCM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02079 175 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
Bva09g02079 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF020 4 126 - -
Bva09g02079 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 126 - -
Bva09g02079 175 SMART rav1_2 16 81 IPR001471 GO:0003700|GO:0006355
Bva09g02079 175 CDD AP2 15 76 IPR001471 GO:0003700|GO:0006355
Bva09g02079 175 ProSiteProfiles AP2/ERF domain profile. 16 75 IPR001471 GO:0003700|GO:0006355
Bva09g02079 175 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
Bva09g02079 175 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Bva09g02079 175 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Bva09g02079 175 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02079 Bva-Chr9 17126004 17126778 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02079 6 139 AP2-EREBP Transcription Factor Family AT1G71520 51.773 8.88e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva09g02079 AP2 4.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02079 - - mtr:MTR_5g008790 182.956