Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02073 ATGGTGAAGCAACACTGTCAAATCCCTGGAATACTCGCATCAGAAGTTAAAAACAGCCAGCAGGTGATGACCGGAAGAACCAAGCCAGTGATGTCTAGATTACTTAGCGTGCCTCTTAAATTAAGAGGCGAACTGATTGCTGCTGGGTGGCCTTCATGGTTAACTGATGCTGCAGGAGAAGCCATCGCAGGGTTGGTTCCTCGTTATTCAGACTCTTTTGAGAAGTTACACCAAATTGGAAAAGGGACTTACAGCAATGTGTATAAAGCTCGTGACCTTGATACCGGTAAAATTGTGGCAATGAAGCAAGTTCGATTTTCTAGTAATGATGTAGAAAGTGTCCGTTTTATGGCTAGGGAAATCTACATTTTGCGTAAACTTGACCATCCCAATGTCATGAAGCTTGAGTGTATTGTCATATCAAGGAGGTCAAACAACTTGTATCTTGTTTTTGAATACATGGACCATGACCTTGTTGGAATAGTAAGAAGACCTGGCATCAAGTTAACTGAAGCACAGATTAAATGTTATATGCAGCAATTGCTTCTTGGGCTTGAACACTGCCATAGTCGTAATGTGTTGCACCGTGACATCAAGGGTTCAAATTTGATGATTGATGACAATGGAGTTCTTAAGATTGGAGACTTCGGTCTAGCTACAGTTTATGAATGTGATAAAAAACAGCACTTGACCAGCCGTGTTGTAACGCTATGGTATAGGGCCCCTGAACTTTTGCTAGGTGCAACAAGCTATGGACCTGCGGTTGATTTGTGGAGTGTTGGTTGCATTATAGGTGAATTGTTTGCTGGGAAGCCTATTATGGCTGGAAGAACGGAGGTTGAACAACTGCATAAGACTTTTAAGCTTTGTGGTTCACCAACTGAAGATTACTTgcaaaaagcaaaattaacTGGGCCAACAAGTTTTAATGGCCAATGTTACAAACGTTGTGTTGCTGAAACATTTAAAGACTTTCCATCTTCAGCCTTGGCTCTTGTTGATAAGTTCCTTGCAATAGAACCTGAGGTTAGAGGATCAGCAACTTCTGCACTCAATTCTGAGTTCTTCACTACAACCCCCCTTCCTTGTGACCCAGCAAGTTTACCAAAGTTCCCCCCAAGCAAGGAGTTTGACAACAAGCTTCgtgaaaaagagaacaaaagAAAACAAGCTGAATCTGTTAAAGGACGTGGAGTTTCTCAAGGCGAAACACCAGATTTCAATGGCCAAGGAGGCGTATTCGTGCAGGTCAAATCAAATCCCAAATCGTGCAATCATAGATGTAACCCTCATGTTAATGGTGAATCTGGCTTTAAGAATGAACCAACTGAAGCATCTGTACATAATGGCTACTTGATTTCTGTATCTACACATGCTGCTGCAGCAGGAATGAAGAAGAAGCCAGAGTTAAGGACACAGAGATCTTATATAACCCAGGCTCCAGAAGATCTACCCGATTCTTCTGTTATACCGGAGAAAGTCACACGTAGCAGAGAAGCCACAGTGAGTTATGTGCCTAAAACAAATAGGATGCACCACTCAGGACCACTGGTGCCTGGAAGGGTTAACATTGACGACATGCTGAGAGAGCACGAGACATTAATGCAACTGGCATTCCGCAATGCCCGTCTTGACAGGGTCAGAACTGTCCAGAAGTGTTG 1661 0.422 MVKQHCQIPGILASEVKNSQQVMTGRTKPVMSRLLSVPLKLRGELIAAGWPSWLTDAAGEAIAGLVPRYSDSFEKLHQIGKGTYSNVYKARDLDTGKIVAMKQVRFSSNDVESVRFMAREIYILRKLDHPNVMKLECIVISRRSNNLYLVFEYMDHDLVGIVRRPGIKLTEAQIKCYMQQLLLGLEHCHSRNVLHRDIKGSNLMIDDNGVLKIGDFGLATVYECDKKQHLTSRVVTLWYRAPELLLGATSYGPAVDLWSVGCIIGELFAGKPIMAGRTEVEQLHKTFKLCGSPTEDYLQKAKLTGPTSFNGQCYKRCVAETFKDFPSSALALVDKFLAIEPEVRGSATSALNSEFFTTTPLPCDPASLPKFPPSKEFDNKLREKENKRKQAESVKGRGVSQGETPDFNGQGGVFVQVKSNPKSCNHRCNPHVNGESGFKNEPTEASVHNGYLISVSTHAAAAGMKKKPELRTQRSYITQAPEDLPDSSVIPEKVTRSREATVSYVPKTNRMHHSGPLVPGRVNIDDMLREHETLMQLAFRNARLDRVRTVQKC 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02073 553 MobiDBLite consensus disorder prediction 375 394 - -
Bva09g02073 553 CDD STKc_CDK9_like 73 356 - -
Bva09g02073 553 Gene3D Transferase(Phosphotransferase) domain 1 156 396 - -
Bva09g02073 553 SUPERFAMILY Protein kinase-like (PK-like) 67 364 IPR011009 -
Bva09g02073 553 Coils Coil 374 394 - -
Bva09g02073 553 Pfam Protein kinase domain 73 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02073 553 SMART serkin_6 73 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02073 553 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 30 543 - -
Bva09g02073 553 Gene3D Phosphorylase Kinase; domain 1 62 155 - -
Bva09g02073 553 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Bva09g02073 553 PANTHER CELL DIVISION PROTEIN KINASE 30 543 - -
Bva09g02073 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Bva09g02073 553 ProSiteProfiles Protein kinase domain profile. 73 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g02073 553 MobiDBLite consensus disorder prediction 364 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02073 Bva-Chr9 17080131 17086501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02073 68 395 Core Cell Cycle Gene Families AT5G10270 51.014 3.58e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva09g02073 Pkinase 4.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02073 K08819 - qsu:112006540 655.21