Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02028 ATGTTTCTTTCCATAGCCCTTTTAGCAGCTCTGATTCCAGTTAATACTGATAGTCAAGCAACGATGCAGAAGATCAACACGAATGATGAACAACGCCTGAGTTTTCTTGGACAGTCGTACCGCTTCAAGCCTACTGACGAGGAATTGGTATCTTACTTGGAGAGAAAGCTCGCTGGTCATTCTATACCATCTCATCTCATTCCTCAAGTTGATATCTATAAATTTTCTCCTCACCAACTCAAAGCTAGGTATCAACGCAATGGAGATGATAGCATGTTCTTTTTCAGTCCAAGAAATCGAAAATTTCTGAATGGGACACGTCCAGACAGAAGAGTTGGAGACATTGGCTATTGGAAATCTTCTAGAACAGTTCGTTTAAAGAGTAAAAACAGTGTAGTTGGAACCAAGATGATACTGAATTTTCATGTGGGAACACCAAAAAAGAGCACTAATACCCATTGGATTATGGAAGAGTTCATTCTTAAGGAAAAGAGTGCTATGACTCATCAAAATCTTGCAACTTCATCTGCAAACCCTCTTGATAAGAAATTCGATGATTTTTGTCTGTACAAAATTCATTATCATAAGACAAAAGCTGATAAGCAAGAACGCCATGACATTCAAGAGCTGGAAATCCCAAACCAAGTGCCTCAAAATGGAGCTCTGGAGTCACAGTCACAACAGAATCAACCCTACTGGATCATGCCAATCGACACATTTAACCCTACAACTTCAACTTCTGCTGCAACTACTACAACAGCAACTCCTGCTCATTCAACTCATTATTTGGGCAACTGTGAACCAATCACACCTTTCCTTAACAATGGAAATTACCTGCTTCCAGCCCCATACATGGGAGAATCCACATTTTCTACGACTTCAATGCCACTTGATACTTTCATCCCTGCAACTGCAACATCAACTCCAGCTCACTCATGTTATTACTCAAGTAATAGTGAACCAATCACACCTTTCCTTAACAATGGAAATTACCTGCTTCCAGCCCCATACATGGGAGAATCCACATTTTCTATGACTTCAATGCCACTTGATACTTTCATCCCTGCAACTGCGACATCAACTCCAGCTCACTCATGTTATTACTCAAGTAATAGTGAACCAATCACTCCCATTTTCAACAGTGTTGATCACTCGGCAACCCTGCTTTCAGTTTCAACTACTTCAATTCCAGCTGATTCAATTCATTACTTGGGCAATTGTGAACCAATCACACCCATTTTCAACAATGTTGATCACTTGGCGACCCCGCTTGCAGAACCATCAATGGAAGACTCTGCCACCATGCTTTCAGATTCAACAGCTTCAACTCCAGCTATAGAGTCACAGTCACAACAGAATCAGCCCTCAATGGTCATGTCAATTGGCACATTTAACCCAGCAGCTTCAACTTCAGCTCCAACTACTGCAACTACAACTCCAGCTCATTCAACTCAATTCTTGGGCAATTGTGAATCAATCGCAGATTTTCTTGACGATGAGAATTGCTTAGCTGCGGCCTTGTTTCAAGCAACATCCATTGGAGATTGTACACCTTCTATGTCTTCAATGCTACTTGACACATTAATCCCTGAAACTGCTACTTCAACAGCAGGTCCAGCTCATTCAAGTTATTACTCAAGCAATGGTGAAGCACTGGAAGACTCGGCGGCCCAGCTTTCAGTTTCAACTGCTCCAACTCCACCTCATTCAACTCCTGCTACGCCTTCAATGCCATGCAATGACAATGGTTTTATGCTTCCACAATGGCCAACGGTGGATGAACAATCAACGACAGAAGATTTTGGTGCATTCAACCTTTTGAATTCACCAGTGAATGATCGATCAACgaatgaagattttgatgGGTTCAACCTTTGGAGCTGGAACTTCTA 1892 0.4144 MFLSIALLAALIPVNTDSQATMQKINTNDEQRLSFLGQSYRFKPTDEELVSYLERKLAGHSIPSHLIPQVDIYKFSPHQLKARYQRNGDDSMFFFSPRNRKFLNGTRPDRRVGDIGYWKSSRTVRLKSKNSVVGTKMILNFHVGTPKKSTNTHWIMEEFILKEKSAMTHQNLATSSANPLDKKFDDFCLYKIHYHKTKADKQERHDIQELEIPNQVPQNGALESQSQQNQPYWIMPIDTFNPTTSTSAATTTTATPAHSTHYLGNCEPITPFLNNGNYLLPAPYMGESTFSTTSMPLDTFIPATATSTPAHSCYYSSNSEPITPFLNNGNYLLPAPYMGESTFSMTSMPLDTFIPATATSTPAHSCYYSSNSEPITPIFNSVDHSATLLSVSTTSIPADSIHYLGNCEPITPIFNNVDHLATPLAEPSMEDSATMLSDSTASTPAIESQSQQNQPSMVMSIGTFNPAASTSAPTTATTTPAHSTQFLGNCESIADFLDDENCLAAALFQATSIGDCTPSMSSMLLDTLIPETATSTAGPAHSSYYSSNGEALEDSAAQLSVSTAPTPPHSTPATPSMPCNDNGFMLPQWPTVDEQSTTEDFGAFNLLNSPVNDRSTNEDFDGFNLWSWNF 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02028 630 Pfam No apical meristem (NAM) protein 39 160 IPR003441 GO:0003677|GO:0006355
Bva09g02028 630 SUPERFAMILY NAC domain 33 194 IPR036093 GO:0003677|GO:0006355
Bva09g02028 630 MobiDBLite consensus disorder prediction 555 582 - -
Bva09g02028 630 ProSiteProfiles NAC domain profile. 36 195 IPR003441 GO:0003677|GO:0006355
Bva09g02028 630 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 24 286 - -
Bva09g02028 630 Gene3D NAC domain 45 201 IPR036093 GO:0003677|GO:0006355
Bva09g02028 630 MobiDBLite consensus disorder prediction 461 482 - -
Bva09g02028 630 PANTHER NAC TRANSCRIPTION FACTOR 56 24 286 - -
Bva09g02028 630 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02028 Bva-Chr9 16669769 16672504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02028 39 202 NAC Transcription Factor Family AT3G15500 43.452 2.49e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g02028 NAM 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02028 - - pvy:116131676 117.857