Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02027 ATGTTTCTTTCCATAGCCCTTTTAGCAGCTCTGATTCCAGTTAATACTGATAGTCAAACAACGATGCAGAAGATCAACACGAATGATGAACAACGCCTGAGTTTTCTTGGACAGTCGTACCGCTTCAAGCCTACTGACGAGGAATTGGTATCTTACTTGCAGAGAAAGCTTGCTGGTCATTCTATACCATCTCATCTCATTCCTCAAGTTGATATCTATAAGTTTTCTCCTCACCAACTCAAAGCTAGGTATCAACGCAATGGAGATGATAGCATGTTCTTTTTCAGTCCAAGAAATCGAAAATGTCTGAATGGGACACGTCCAGACAGAAGAGTTGGAGACATTGGCTATTGGAAATCTTCTAGAACAGTTCGTTTAAAGCGTAAAAACAGTGTAGTTGGAAGCAAGATGATACTGAATTTTCATGTGGGAACACCAAAAAAGAGCACTAATACCCATTGGATTATGGAAGAGTTCATTCTTAAGGAAAAGAGTGCTATAACTCATCAAAATCTTGCAACTTCATCTGCAAACCCTCTTGATAAGAAATTCGATGATTTTTGTCTGTACAAAATTCATTACCATAAGACAAAAGCTGATAAGCAAGAACGCCATGACACTCAAGAGATGGAAATCCCAAACCAAGTGCCTCAAAATGGAGCTCTGGAGTCACAGTCACAACAGAATCAGCCCTACTGGTTCATGCCAATCGACACATTTAACCCTGCAACTTCAACTTCTGCTGCAACTACTACAACAGCAACTCCTGCTCATTCAACTCATTATTTGGGCAACTGTGAACCAATCACACCTTTCCTTAACAATGGAAATTACCTGCTTCCAGCCCCATACATGGGAGAATCCACATTTTCTATGACTTCAATGCCACTTGATACTTTCATCCCTGCAACTGCAACATCAACTCCAGCTCACTCATGTTATTACTCAAGTAATAGTGAACAAATCACTGCCATTTTCAACAGTGTTGATCACTCGGCGACCCTGCTTTCAGTTTCAACTACTTCAACTCCAGCTGATTCAACTCATTACTTGGGCAACTGTGAACCAATCACACCCATTTTCAACAATGTTGATCACTTGGCGACCCCGCTTGCAGAACCATCAATGGAAGACTCTGCCACCATGCTTTCAGATTCAACTGCTTCAACTCCAGCTATAGAGTCACAGTCACAACAGAATCAACCCTCAATGGTCATGTCAATTGGCACATTTAACCCAGCAACTTCAACTTCAGCTCCAACTACTGCAACTACAACTCCAGCTCATTCAACTCAATTCTTGGGCAATTGTGAATCAATCACAGATTTTCTTGACGATGAGAATTGCTTAGCTGCGGCCCTGTTTCAAGCAACATCCATTGGAGATTGTACATCTTCTATGCCTTCAATGCTACTTGACACATTAATCCCCGAAACTGCGACTTCAACAGCAGATCCAGCTCATTCAAGTTATTACTCAAGCAATGGTGAAGCACTGGAAGACTCGGCGGCCAAGCTTTCAGTTTCAACTGCTCCAACTCCACCTCATTCAACTCCTGCTACGCCTTCAATGCCATGCAATGACAATGGTTTTATGCTTCCACAATGGCCAACGGTGGATGAACAATCAACGACAGATTTTTTTGATGCATTCAACCTTTCGAATTCACCAGTGAATGATCGATCAACgaatgaagattttgatgGGTTCAACCTTTGGAGCTGGAACTTCTA 1733 0.4155 MFLSIALLAALIPVNTDSQTTMQKINTNDEQRLSFLGQSYRFKPTDEELVSYLQRKLAGHSIPSHLIPQVDIYKFSPHQLKARYQRNGDDSMFFFSPRNRKCLNGTRPDRRVGDIGYWKSSRTVRLKRKNSVVGSKMILNFHVGTPKKSTNTHWIMEEFILKEKSAITHQNLATSSANPLDKKFDDFCLYKIHYHKTKADKQERHDTQEMEIPNQVPQNGALESQSQQNQPYWFMPIDTFNPATSTSAATTTTATPAHSTHYLGNCEPITPFLNNGNYLLPAPYMGESTFSMTSMPLDTFIPATATSTPAHSCYYSSNSEQITAIFNSVDHSATLLSVSTTSTPADSTHYLGNCEPITPIFNNVDHLATPLAEPSMEDSATMLSDSTASTPAIESQSQQNQPSMVMSIGTFNPATSTSAPTTATTTPAHSTQFLGNCESITDFLDDENCLAAALFQATSIGDCTSSMPSMLLDTLIPETATSTADPAHSSYYSSNGEALEDSAAKLSVSTAPTPPHSTPATPSMPCNDNGFMLPQWPTVDEQSTTDFFDAFNLSNSPVNDRSTNEDFDGFNLWSWNF 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02027 577 PANTHER NAC TRANSCRIPTION FACTOR 56 24 362 - -
Bva09g02027 577 Pfam No apical meristem (NAM) protein 39 160 IPR003441 GO:0003677|GO:0006355
Bva09g02027 577 MobiDBLite consensus disorder prediction 502 524 - -
Bva09g02027 577 Gene3D NAC domain 45 201 IPR036093 GO:0003677|GO:0006355
Bva09g02027 577 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 24 362 - -
Bva09g02027 577 ProSiteProfiles NAC domain profile. 36 195 IPR003441 GO:0003677|GO:0006355
Bva09g02027 577 SUPERFAMILY NAC domain 33 194 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02027 Bva-Chr9 16646719 16649257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02027 39 202 NAC Transcription Factor Family AT3G15500 42.857 3.48e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g02027 NAM 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02027 - - pvy:116131676 118.627