Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02019 ATGGGACGTTCCCCTTGTTGCGAGAAAGCTCACACCAACAAAGGTGCTTGGACCAAAGAAGAAGACCAACGCCTTATTGATTACATACGCGTCCATGGCGAAGGTTGCTGGCGTTCTCTCCCTAAAGCTGCTGGATTGCTTAGATGCGGTAAGAGTTGCAGATTGAGGTGGATAAACTACCTCCGTCCTGACCTCAAACGTGGGAATTTCACTGAGGAGGAAGATGAATTAATCATCAAACTCCATAGTTTACTTGGAAACAAATGGTCCCTGATTGCGGGTCGATTACCTGGCAGAACCGATAACGAGATTAAGAATTACTGGAATACTCACATCAAGCGCAAGCTCATAAGTCGTGGAATTGACCCACAAACTCACCGTTCTCTTAATGAAGCCGCCGCCGCAGCCCCTTCCGCTGCCCCGGCTACCGCCGTTGCCGCTACCAACCCCTCTCAGTTGGATTTCAAGAGTTATTCTTTTCCAATTGGGGAAATCAATCTCGCAAAACAGAGCGAAGATAATttcaattgtattaattttggCACTGAAGTGAAGAAACCCAAGAAAGAGACCATTGAAGATCTGAACTATGCCAGCAGTGGCACAACCACTGAGGAAGGGTCGCCATTGCAGCAAGATTTGTACGGTGGCGAGCTCAATCTTGAGCTCTCAATCGGTCTTTTCCCACATCACACCGAGTCAACTCGAGGGAACTCGGCCCAGTCGAAACTCACTCGAGTTCCTTTCAAGCTTGACGGCGCGGTGCAGTCGGTTACGGCCGCTCAGCCGGCGGCGGTGTGCTTGTGTTGCCCGTTGGGTTACCAGACCGGCGAACTGTGCAGAAACTGCCAGTTTAAGAGATA 863 0.4925 MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRSLNEAAAAAPSAAPATAVAATNPSQLDFKSYSFPIGEINLAKQSEDNFNCINFGTEVKKPKKETIEDLNYASSGTTTEEGSPLQQDLYGGELNLELSIGLFPHHTESTRGNSAQSKLTRVPFKLDGAVQSVTAAQPAAVCLCCPLGYQTGELCRNCQFKR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02019 287 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 248 - -
Bva09g02019 287 CDD SANT 69 112 IPR001005 -
Bva09g02019 287 CDD SANT 16 61 IPR001005 -
Bva09g02019 287 SMART sant 66 114 IPR001005 -
Bva09g02019 287 SMART sant 13 63 IPR001005 -
Bva09g02019 287 Gene3D - 68 136 - -
Bva09g02019 287 Gene3D - 14 66 - -
Bva09g02019 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva09g02019 287 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva09g02019 287 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva09g02019 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva09g02019 287 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva09g02019 287 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva09g02019 287 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bva09g02019 287 PANTHER MYB-RELATED PROTEIN 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02019 Bva-Chr9 16555425 16556767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02019 1 227 MYB Transcription Factor Family AT4G09460 62.661 1.69e-96 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva09g02019 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02019 K09422 - jre:109006329 406.757