Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g02018 ATGGCTTCCGCAGCCACTCCACAGCTTCTCTACAATCCCTTCTTGCATAATCGCCGAGCCACAAGATTTTTAAGAACAACAACCACAAAATCAAACCCCAAAAACAACGCTTTGCTGGTTTTCGCTTCACAGTCACAGGATTCTCCGAGGCACAACAGAGCACCGCCAGGAGTTGACACAAGAATCCATTGGGAAAACGAAGATGAAGGGTGGATTGGAGGCAGCAGCAGTAAACAACAGCAATCTACTGCAGAGGACGACCCCAAGAGTCTATTGGGTGAAAAGTTTGCAGATTTGCTTAACGATGCTTCTGGCTCTCATTATGAATTCTTAGGGATTACACCAGAAGCTGATCTAGAAGAGATTAAAGCTGCTTACCGCAGATTGTCAAAGGAATTCCATCCAGACACAACTTCCCTCCCTCTCAAAGCTGCCTCagaaaaattcatgaaattaagAGAAGTTTACAATGTTCTAAGCAATGACGAAAGTAGAAGGTTTTATGACTGGACACTTGCTCAAGAGGCTGCAAGCCGCAAAGCGGAGAAGATGAGAATGAGATTGGAGGATCCCTATATGAAAGAAGTGGAGAACTATGAACCTGTTCCAGACATGGTTGATCGGCTTGGAGGTAGAAATTTGAAGCTTAGTGATCAAGCAGTGACTGCCCTGACGGTCGATgttttcatcattatttttgcAATTTGTTCCATCGTTTATGTAGTTGTCTTTAAAGCACCATATTATTA 749 0.4206 MASAATPQLLYNPFLHNRRATRFLRTTTTKSNPKNNALLVFASQSQDSPRHNRAPPGVDTRIHWENEDEGWIGGSSSKQQQSTAEDDPKSLLGEKFADLLNDASGSHYEFLGITPEADLEEIKAAYRRLSKEFHPDTTSLPLKAASEKFMKLREVYNVLSNDESRRFYDWTLAQEAASRKAEKMRMRLEDPYMKEVENYEPVPDMVDRLGGRNLKLSDQAVTALTVDVFIIIFAICSIVYVVVFKAPYY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g02018 249 ProSiteProfiles dnaJ domain profile. 106 172 IPR001623 -
Bva09g02018 249 SMART dnaj_3 105 164 IPR001623 -
Bva09g02018 249 MobiDBLite consensus disorder prediction 72 87 - -
Bva09g02018 249 PRINTS DnaJ domain signature 126 141 IPR001623 -
Bva09g02018 249 PRINTS DnaJ domain signature 144 164 IPR001623 -
Bva09g02018 249 PRINTS DnaJ domain signature 108 126 IPR001623 -
Bva09g02018 249 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 248 IPR044618 -
Bva09g02018 249 Pfam DnaJ domain 107 169 IPR001623 -
Bva09g02018 249 Gene3D DnaJ domain 97 193 IPR036869 -
Bva09g02018 249 SUPERFAMILY Chaperone J-domain 69 168 IPR036869 -
Bva09g02018 249 MobiDBLite consensus disorder prediction 68 88 - -
Bva09g02018 249 CDD DnaJ 107 161 IPR001623 -
Bva09g02018 249 ProSitePatterns Nt-dnaJ domain signature. 149 168 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g02018 Bva-Chr9 16536170 16538394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g02018 107 174 C2H2 Transcription Factor Family AT1G74250 38.889 2.85e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g02018 K23051 - tcc:18610266 338.576