Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01991 ATGCAACCCAATTCTGCCGGTAGCGGCGGCAGCAGCGGCGGAGGTGAACTGGGTCGGGGTGGACTTGCCCGGTTCCACTCAACTCCGTCGACCTGGTTAGAAGCACTTCTtaaggaggaggaagaagaagaagacccATTGAATACAAACGAGTGCTTTACTCAGCTACTTTCTAGTAACTTGTCTGCTTCACCCAGTTCCAGAAATTCGTTTCCTTTTGATTCATCGGCCGATGTGAGCACTTTGGATGCTAGTTCGTCAACTGGGTTTCTCCGGCAGAGTAGTTCTCCGGCGGAGTTTTTCGGGAATTCGGTGACTGGCTCTGAAGGGTACTTCTCGAAGTATGGGTTTCCCTCCAATTACGCGGTTTCACGACATATTGATGCGCCTTCTTCCAGCAATACAACCAGCCAGaaaGTTGAGAATAGTGCTAACGCGCCAGAAGTTGAGATGGAGAAGATTTTGGAGGAGTCAGTACCTTGCAGAGTTCGGGCAAAGCGTGGTTTTGCTACACATCCAAGGAGCATTGCCGAAAGGGTTCGGAGAAGTCGGATCAGTGACCGCATAAGGAAGCTGCAAGAACTTGTTCCAAACATGGATAAGCAAACAAATACTGCAGATATGTTAGATGAGGCGGTAGCATATGTTAAGTTTCTACAAAAGCAAATTGAGGAACTATCAGAGCTCCAAAGTAGATGTACATGCATGGCTCCTGAGTA 719 0.4645 MQPNSAGSGGSSGGGELGRGGLARFHSTPSTWLEALLKEEEEEEDPLNTNECFTQLLSSNLSASPSSRNSFPFDSSADVSTLDASSSTGFLRQSSSPAEFFGNSVTGSEGYFSKYGFPSNYAVSRHIDAPSSSNTTSQKVENSANAPEVEMEKILEESVPCRVRAKRGFATHPRSIAERVRRSRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEELSELQSRCTCMAPE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01991 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 234 IPR036638 GO:0046983
Bva09g01991 239 MobiDBLite consensus disorder prediction 129 149 - -
Bva09g01991 239 MobiDBLite consensus disorder prediction 1 25 - -
Bva09g01991 239 SMART finulus 175 225 IPR011598 GO:0046983
Bva09g01991 239 Coils Coil 209 229 - -
Bva09g01991 239 MobiDBLite consensus disorder prediction 129 144 - -
Bva09g01991 239 Pfam Helix-loop-helix DNA-binding domain 174 220 IPR011598 GO:0046983
Bva09g01991 239 PANTHER BNAA05G18250D PROTEIN 13 237 - -
Bva09g01991 239 Gene3D - 170 237 IPR036638 GO:0046983
Bva09g01991 239 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 237 - -
Bva09g01991 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01991 Bva-Chr9 16218736 16222734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01991 24 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 49.791 1.99e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva09g01991 HLH 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01991 - - jre:109018728 228.794