Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01987 ATGTCAGTATATGGTCAAGATCTATTTATTCGAATGGTTGCGCCAGATGTCCAAGAAGAGTCAATCAAAAGGCATAGGAAAATAGTGGCAGCAGTAACAACTACTGTTCTGTTGATTCTCATGGTGTTTGTcgttttcttttgcatttacATGAGGAGAAGAAAGTTCAAAGAGACAGCCTTGtcaagagaaaaggaagatgaAGCTGCACATGAAGCTATGGAACttccattcttcaattttgctACAATAGCTAATGCAACAAATGATTTCTCAATTGACAAGAAGCTTGGAGAAGGTGGTTTTGGCCCAGTATACATGGGTACACTAGAAGATGGACAAGAGATAGCTGTCAAAAAGCTGGCGCATAGTTCTGGACAAGGAATGAAAGAATTTAAGAATGAAGTTATATtatgttccaaacttcaacacaGGAATCTCGTTAAGCTTCTTGGTTGTTGCATTCAAGGTCATGATAAGATGCTTATCTATGAATACATGCTTAACAAAAGCCTAGActactttctttttgATTCTTATCAAAGTAAATGCTTAGATTGGACAAAGCGTCGCAACATCATATTTGGGATTGCTCGGGGCCTTCTCTATCTTCATCAAGACTCCAGAATGAGAATTATACACAGAGATCTTAAagcaagtaatattttattagatagtCAGTTATTACctaaaatttcagattttggtTTAGCCAAAATATTTGGAGGAGATCAAATTGAAGGAAATACAAACAGAGTGGCTGGTACATAtGGTTATATGGCACCTGAATATGCTAGTGATGGAGCATTCTCAATTAAATCTGATGTATTTAGCTATGGAATATTATTGCTAGAGATAATAAGTAGCAAAAGAAACCGAGGCGTTTATCATACAAACGTGAGCCTTAATCTTATTGGTCATGCTTGGAAGTTGTGGAAGGAAGGCAGCGCAATGGAATTGGTAGATGCTTGTTTGGAGGACTCATTTGTTGTATCAGAAGTATTACGTTATATCCATATTGGTCTTCTATGTGTGCAACAAAATCCTGACGATAGGCCAGACATGGCATCTGTGGTTGTGATGTTGAGCAGTGAATGTGCATTGCCTCGGCCTAAGGAGCCTGGTTTCTTGATGGAAAGGGCTTCAGTTATAGCAGAATCTTCTTCTAGCAAGCCTACACTTTCTTCAACTAATGAAATGAGTTTTACGCATTTAGCTGGAAGATA 1226 0.345 MSVYGQDLFIRMVAPDVQEESIKRHRKIVAAVTTTVLLILMVFVVFFCIYMRRRKFKETALSREKEDEAAHEAMELPFFNFATIANATNDFSIDKKLGEGGFGPVYMGTLEDGQEIAVKKLAHSSGQGMKEFKNEVILCSKLQHRNLVKLLGCCIQGHDKMLIYEYMLNKSLDYFLFDSYQSKCLDWTKRRNIIFGIARGLLYLHQDSRMRIIHRDLKASNILLDSQLLPKISDFGLAKIFGGDQIEGNTNRVAGTYGYMAPEYASDGAFSIKSDVFSYGILLLEIISSKRNRGVYHTNVSLNLIGHAWKLWKEGSAMELVDACLEDSFVVSEVLRYIHIGLLCVQQNPDDRPDMASVVVMLSSECALPRPKEPGFLMERASVIAESSSSKPTLSSTNEMSFTHLAGR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01987 408 SUPERFAMILY Protein kinase-like (PK-like) 75 378 IPR011009 -
Bva09g01987 408 CDD STKc_IRAK 97 362 - -
Bva09g01987 408 Pfam Domain of unknown function (DUF3403) 363 408 IPR021820 GO:0004674
Bva09g01987 408 Gene3D Phosphorylase Kinase; domain 1 52 166 - -
Bva09g01987 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Bva09g01987 408 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 4 401 - -
Bva09g01987 408 PIRSF TyrPK_CSF1-R 169 401 - -
Bva09g01987 408 PIRSF TyrPK_CSF1-R 4 182 - -
Bva09g01987 408 MobiDBLite consensus disorder prediction 388 408 - -
Bva09g01987 408 Pfam Protein tyrosine and serine/threonine kinase 92 361 IPR001245 GO:0004672|GO:0006468
Bva09g01987 408 Gene3D Transferase(Phosphotransferase) domain 1 167 369 - -
Bva09g01987 408 SMART serkin_6 91 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01987 408 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 401 - -
Bva09g01987 408 ProSiteProfiles Protein kinase domain profile. 91 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01987 Bva-Chr9 16163392 16167715 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01987 28 390 Receptor kinase-like Gene Family AT4G23190 51.762 3.92e-135 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01987 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01987 - - cit:102628625 499.204