Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01978 ATGGAGAACTTGAAGACACCTTTCAAGGGTGTTCTAAATGATATTCTAGGAAGAACACTGTGTTACAAGGAAGATTGGGTTTCTGGTCTCCGTTCAGGAATTGGAATATTGGCGCCAACTACCTATATCTTCTTCGCTTCTGCTCTTCCTGTTATTGCCTTCGGCGAGCAGATAAATAGAGACACAGatgGAAGTTTAAGTACAGTAGAAACTTTGGCTTCTACTGCTATATGTGGAATTATACACTCAATTCTTGGTGGGCAGCCTTTACTTATACTAGGAGTTGCAGAACCCACAATCATTATGTACAACTATTTGTACAACTTCGCCAAAGATAGGGATGGTTTGGGAAGAGAGCTCTTCTTGGCTTGGGCAGGATGgGTTTGTGTTTGGACTTCTCTCTTGCTATTTCTTCTAGCAATCTTCAATGCTGCCACCGTCATCAAAAGATTTACAAGGGTTGCGGGTGAGCTTTTTGGCATGTTGATTGCAGTCTTGTTCGTTCAAGAAGCTATCAAgGGAGTGGTTAGTGAGTTTAATGTTCCTGAAGAGCAAGATCCAACATCAGAGAGGTACCAATTTCAGTGGCTCTATGTTAATGGATTATTTGGTCTGATCTTCACCTTTGGGCTTCTCTCCACTGCTTTAAAGAGCAGGAGAGCTAGGTCTTGGTTATATGGCATAGGGTGGTTAAGAAGTTTCATTGCAGACTATGGAGTTCCCTTGATGGTTGTGGTGTGGACAGTTCTGTCATTCACGGTACCAAGTAAATTACCCTCTGGAGTTCCCAGAAGACTCTTTTCTCCTGTTGCTTGGGAATCAATAACTTTGCACCATTGGACAGTCGTCAAAGATATGGTGAAGGTACCCCTAGCATATATCTTTGCTGCTATTATTCCTGCCATTATGATAACAGGGCTTTACTTCTTCGACCACAGTGTTGCTTCCCAGTTAGCACAACAAAAGGAATTCAATCTTAAGAAACCTTCTGCCTATCATTATGATGTATTGTTGCTCAGTTTCATGGTACATATCTCTGTGTTAAATgtaattgtttgtttgttaatCTTAACTTTGCTTTGTGGTTTACTTGGTTTACCGCCATCAAATGGAGTTTTACCTCAATCTCCCATGCACACCAAGAGTCTAGCTGTTCTCAAGAGACAGTtgataagaagaaagatgatGAAAACTGCCGAAGAAAGCATAAGGCAGAAGGCTAGCAACTCTGATATCTATGGGAAGATGCAAGCAGTGTTCATAGAAATGGATAGAAGTCCTGCTACTTCTGTGGTTAAAGAGCTAGAAGATTTGAAAGAGGCTGTTCTCAAAGCTGAAGGGGAAGGGGATAACAAAAAGGAGACATTTGACCCTAAGAAACATATTGACGCTTATCTACCTGTAAGAGTTAATGAGCAGAGAGTGAGCAATTTTTTACAATCACTCCTTGTGGGAGCATCAGTATTTGCTATTCCTGCCATAAAGAAGATACCCACTTCAGTTCTATGGGGTTACTTTGCCTACATGGCCATTGATAGCCTTCCTGGAAACCAATTCTGGGAGAGGATGCTACTTCTATTTGTAGCTCCTAGTCGGCGATACAAGGTGCTGGAAGGTGATCATGCTTCCTTTGTGGAGTCGGTACCATTTAGATACATACTCTTCTTCACACTCTTCCAATTTGTGTATTTCTTGGTTTGTTTTGGAGTCACTTGGATTCCTATAGCTGGAATATTGTTCCCTTTGCCCTTCTTTCTGCTGATCACAATAAGACAACATCTTCTCCCTAAGCTGTTCAATATTCATCATTTAAGGGAACTTGATGCAGCTGAATATGAAGAAATTCCCGGTGCTCCAAGGCTTTCTTTCAGTGGAAGTCATGTgacaattttctcaaaatttgtttcattgtATGAAGTTGGAGTTCAAAATTGCTCTACCTTCTATCAGGACATGGAGTCACCTCGCTTTGAGTCCATTGAAATTGGTGATGCTGAAATATTAGATGAATTAACTACAAGTAGGGGAGAGTTGAAGGTCAGAACTGTTAGCTTCAATAACGAGGAAAGAGGTGGCCAGGTTTATCCTGATGAAATCGTCCCAGAAGAGTG 2111 0.4027 MENLKTPFKGVLNDILGRTLCYKEDWVSGLRSGIGILAPTTYIFFASALPVIAFGEQINRDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTIIMYNYLYNFAKDRDGLGRELFLAWAGWVCVWTSLLLFLLAIFNAATVIKRFTRVAGELFGMLIAVLFVQEAIKGVVSEFNVPEEQDPTSERYQFQWLYVNGLFGLIFTFGLLSTALKSRRARSWLYGIGWLRSFIADYGVPLMVVVWTVLSFTVPSKLPSGVPRRLFSPVAWESITLHHWTVVKDMVKVPLAYIFAAIIPAIMITGLYFFDHSVASQLAQQKEFNLKKPSAYHYDVLLLSFMVHISVLNVIVCLLILTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMMKTAEESIRQKASNSDIYGKMQAVFIEMDRSPATSVVKELEDLKEAVLKAEGEGDNKKETFDPKKHIDAYLPVRVNEQRVSNFLQSLLVGASVFAIPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFVAPSRRYKVLEGDHASFVESVPFRYILFFTLFQFVYFLVCFGVTWIPIAGILFPLPFFLLITIRQHLLPKLFNIHHLRELDAAEYEEIPGAPRLSFSGSHVTIFSKFVSLYEVGVQNCSTFYQDMESPRFESIEIGDAEILDELTTSRGELKVRTVSFNNEERGGQVYPDEIVPEE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01978 703 PANTHER ANION EXCHANGE PROTEIN 1 700 IPR003020 GO:0005452|GO:0006820|GO:0016020
Bva09g01978 703 Pfam HCO3- transporter family 202 389 IPR011531 GO:0006820|GO:0016021
Bva09g01978 703 Pfam HCO3- transporter family 468 558 IPR011531 GO:0006820|GO:0016021
Bva09g01978 703 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Bva09g01978 703 Gene3D Helical hairpin bin 18 59 - -
Bva09g01978 703 Coils Coil 428 455 - -
Bva09g01978 703 PANTHER BORON TRANSPORTER 4-RELATED 1 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01978 Bva-Chr9 16107493 16110593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01978 1 700 Antiporters AT1G74810 67.324 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01978 K24194 - gmx:100811184 1046.96