Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01976 ATGGCTTCAGCAGTAGTTGATCTATTGATTGGCAAGGTGGTTTCTTTTATAGAGAGCGAAGCATCTTTGCTTGGTAATGTTGCTGATGAGCTTCGTGAAATGCAGCGTGAACTGCAAAGCATGAGATCATTCATGGTGGATGTACACTCAACTCTTGATGAATCAGAACAAGAAAAGACATGGGTGGCCCAAGTGAGAGATATTGCTATAATGCTTCAAAACATCATTGACGAGTTTGACTATCATAAGAATAAGCTCAAAGCTTCAAAGAAAAGCACAAGATTTTTCCGTCAAGCCGTATATTTCCCCCAAAACCTTTGGATAAAGCATCAGGTAGCATCTAAGTTGAAGATAATGAAGACAGCCATTAATAACATTTCAGAGAGGAAAAACAGATATAAAGGTGAGAATCTTTCACAGGAGACTGCTTCTCATGTTGGTCCTCATGATTGGTTGAGAATTCACCACGAGTTGCCACTTTTCCTAAGAGATGATGATGTGGTGGGATTTGATGAGagcaaagaaaagattatgaaattattagtAAATGAAGAACAAGATCGCACTGTTATATCAATATGGGGAGATGGAGGTTCTGGTAAGACCACTTTGGCAGCTAATGTATTCAATAACttgaaaacacaaaaacattTTGATTGCTTTGCATGGATCACTGTCTCACAAAGATATGGAGTTCAAGACATTTTTAGATCAATGATTAAGGAGTTATATAAATCAAGAAATGATCACATTCATGAAGATTTGAGTAGATTGGATAGTAGATCATTGGTAGAGAAAATTGTGAGCTACTTGCAAGGGAAAAAATATCTTGTGATTTTGGATGATATTTGGAGTCCTAATCTGTGGGGAGATATAAGCATTGCACTTCCAGAAGGTTCACAGGGAAGCCGGGCGGTCCTCACCACAAGATTTAATGCAATTGCTTCATCTTCCTTTGGAGAGCAAAGCCATGTTCACCATATTAAACCCCtcaatgaagatgaagctttGACTCTTTTTTGCAAGAAGGCTTTCTCCAATGGACGTTGCCCAACTAATCTTGAAATAATTGCCAAGAGCCTTGTGGAAAAATGTGATGGACTACCTCTAGCACTTGTAGCTTTGGGTGGTTGCATGTCTTCTAAAAAGCTAGAATCTGAGTGGACAAAGGTTGATCGTAGCTTGAACTGGCAGCTAAGTAACAATCCAGAACTTCAGAAAATGAAGTCAATCTTGTTATTAAGCTACTATGATTTGCCTTATAGATTGAAGCCTTGCTTCCTAtattgttctatttttcccGAAGATTATTTGATGACGACGCCAAGGCTCATCAGGTTGTGGCTTGCGGAAGGATTTTTAGAAGAGATTGAAGGTCTAACACCAGAAGAAGTTGGTGAAACATACCTGATGGAACTTGTGCGTAGGAGCTTGCTCCATGCGGTTCAAAGAAATCAACTTGGCCTGACAGAAGAATGCAGGATGCACGATATACTACGGGACTTAGCTATTTCAATCTCAGCTAATGAGAGGTTCTCTACCATACggaaagatgaaaaagcaATTCAAGGCCACAATGCTCCTATCTTGGCAATCCACGGAACTATTATGTCAAACTTGCATTACAGATTTTCAAAGGTTCGATCCTTCTTTATGTTCCTGTCACCCTCTATTAAATTGCCTTTTGGGTTTAAATTCTTGAGGGTCTTAGATCTTCAAGGTTCCAATATCAACAAAGTTCCTTCTGATATCATGATCTGTTACAATCTAAGATACCTAAACTTGGCTGAGACTAATGTGAAGAAGCTTCCAGAATCAATTGGACAACTCTGTCAGTTGCACACTTTAGACCTCAGGCTTACTTACATTGAAGAACTTCCTTCTGGGGTTACCAGATTGCACAACTTACGTCATCTAGTTGTGAGTCGCAAACCACAAGTTGTTCCTGGCAGGTTTAACTTTGATTGGGGTGTAAAAGTGCCGCCAAATATTTGTAGGCTTGTGAACTTACAAGTTCTGGGTGACATTGAAGTAAATGGTTACCTTGTTAGAAAGCTCAAGAACTTGAGTAATTTGAGAAAGCTTTCGCTCACTAAGGTGACTGAAGAAGTTCAAAAGGACTTGTGCCTTGCCATTGAGACAATGGAACACCTTCGTAATTTGGCTGTGATGACAATTCATGATGACCAAACTATGTTACGTTTGGATTCATTATTATCAACATCTCCTCATCTAGAAACACTAAGACTTTATGGGAAGATATGGAAGGTTCCTGGTTTGTTTCAATCTCTAGAGAACCTCATTAAATTGGCATTGACCTGGACTAAGTCGCAAGAAGATATCCTTCCTTACATAGAAGCACTGCCTAGTTTGGAGACACTTTATTTGCACAAAGCTTATATGGGAGAAAAGTTGTACTTTGGTAAAGGGTTCCAGAAGCTTATGACATTACTTATACTTGATATGCCTCAATTGAAGCAAATTGTAGTCGAAGATGGGGTGATGCCAAGCATTCAGAATCTTCGTGTTTCCTTCTGTTCAAATTTAGAAACAATGTCTGGCATGGGCTATCTCAAATCTCTAGAGCAAGTGTATTTTGCACATGTTTCTGATAAGTTACGTGACAATGTGCTCCAAAATTTGGCAAAGTCTGAGCACCAGCCCCAAGTTTTCTGGAACTG 2681 0.3819 MASAVVDLLIGKVVSFIESEASLLGNVADELREMQRELQSMRSFMVDVHSTLDESEQEKTWVAQVRDIAIMLQNIIDEFDYHKNKLKASKKSTRFFRQAVYFPQNLWIKHQVASKLKIMKTAINNISERKNRYKGENLSQETASHVGPHDWLRIHHELPLFLRDDDVVGFDESKEKIMKLLVNEEQDRTVISIWGDGGSGKTTLAANVFNNLKTQKHFDCFAWITVSQRYGVQDIFRSMIKELYKSRNDHIHEDLSRLDSRSLVEKIVSYLQGKKYLVILDDIWSPNLWGDISIALPEGSQGSRAVLTTRFNAIASSSFGEQSHVHHIKPLNEDEALTLFCKKAFSNGRCPTNLEIIAKSLVEKCDGLPLALVALGGCMSSKKLESEWTKVDRSLNWQLSNNPELQKMKSILLLSYYDLPYRLKPCFLYCSIFPEDYLMTTPRLIRLWLAEGFLEEIEGLTPEEVGETYLMELVRRSLLHAVQRNQLGLTEECRMHDILRDLAISISANERFSTIRKDEKAIQGHNAPILAIHGTIMSNLHYRFSKVRSFFMFLSPSIKLPFGFKFLRVLDLQGSNINKVPSDIMICYNLRYLNLAETNVKKLPESIGQLCQLHTLDLRLTYIEELPSGVTRLHNLRHLVVSRKPQVVPGRFNFDWGVKVPPNICRLVNLQVLGDIEVNGYLVRKLKNLSNLRKLSLTKVTEEVQKDLCLAIETMEHLRNLAVMTIHDDQTMLRLDSLLSTSPHLETLRLYGKIWKVPGLFQSLENLIKLALTWTKSQEDILPYIEALPSLETLYLHKAYMGEKLYFGKGFQKLMTLLILDMPQLKQIVVEDGVMPSIQNLRVSFCSNLETMSGMGYLKSLEQVYFAHVSDKLRDNVLQNLAKSEHQPQVFWN 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01976 893 Pfam Rx N-terminal domain 5 95 IPR041118 -
Bva09g01976 893 Gene3D - 416 505 IPR036388 -
Bva09g01976 893 PANTHER DISEASE RESISTANCE PROTEIN RP 17 877 IPR044974 GO:0006952
Bva09g01976 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 430 IPR027417 -
Bva09g01976 893 Gene3D - 5 113 - -
Bva09g01976 893 Gene3D - 153 327 IPR027417 -
Bva09g01976 893 SUPERFAMILY L domain-like 494 873 - -
Bva09g01976 893 Gene3D - 330 415 IPR042197 -
Bva09g01976 893 PRINTS Disease resistance protein signature 270 284 - -
Bva09g01976 893 PRINTS Disease resistance protein signature 190 205 - -
Bva09g01976 893 PRINTS Disease resistance protein signature 687 703 - -
Bva09g01976 893 PRINTS Disease resistance protein signature 365 379 - -
Bva09g01976 893 CDD RX-CC_like 2 128 IPR038005 -
Bva09g01976 893 Pfam NB-ARC domain 172 416 IPR002182 GO:0043531
Bva09g01976 893 PANTHER OS09G0479500 PROTEIN 17 877 - -
Bva09g01976 893 Gene3D Ribonuclease Inhibitor 531 647 IPR032675 -
Bva09g01976 893 Gene3D Ribonuclease Inhibitor 658 882 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01976 Bva-Chr9 16077273 16087929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01976 176 387 WRKY Transcription Factor Family AT5G45050 26.168 2.40e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01976 K13457 - csin:114257295 786.178