Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01972 ATGGCTTCAGCAGCAGTTGATCTATTGATTGGCAAGGTGGTTTTTTTTATAGAGAGTGAAGCATCTTTGCTTGGTAATGTTGCTGATGAGCTTCGTGAAATGCAGCGTGAACTGCAAAGCATGAGATCATTCATGGTGGATACACACTCAACTCTTGATGAATCAGAACAAGAAAAGACATGGGTGGCCCAGGTGAGAGATACTGCTATAATGCTTCAAAACATCATTGACGAGTTTGACTATCATAAGAACAAGCTCAAAGCTTCAAAGAAAAGCACAAGATTTTTTCATCAAGCCATATATTTCCCCCAAAACCTTTGGATAAAGCATCAGGTAGCGTCTAAGTTGAAGACAATGAAGACAGCCATTAATAACATTTCAGAGAGGAAAAACAGATATAAAGGTGAGAATCTTTCACGGGAAACTCCTTCTCATGTTGGTCCTCATGATTGGTTGAGAATTCACCACGAGTCACCACTTTTCCTAAGAGATGATGATGTTGTGGGATTTGATGAGAGCAaagacaagattatgaaattattagtAAACGAAAAACAGGATCACACTGTTATATCAATATGGGGAGATGGAGGTTCAGGTAAGACCACTTTGGTAGCTAATGTATTCAATAACTTGAAAACACAAGAACATTTTGATTGCTTTGCGTGGATCACTGTCTCACAAAGATACGGAGTTCAAGACATTTTTAGATCAATGATTAAGGAGTTATGTAAGTCAAGAAATGATCAAATTCCTGAAGATTTGAGTAGCTTGGATAGTAGATCATTGGTAGAGAAAATTGTGAGCTACTTGCAAGGGAAAAAGTATCTTGTGATTTTGGATGATATTTGGAGTCCTGATCTATGGGGAGATATAAGCATTGCACTTCCAAAAGGTTCACAGGGAAGCCGAGCGGTTCTCACCACAAGATTTTATGCAATTGCTTCATCTTCCTTTGGAGTGCAAAGCCATGTTCACCATATTAAACCCCTCAATGAAGCTGAAGCTTTGACTCTTTTTTGCAAGAAGGCTTTCTCCAATGGATGTTGCCCAACCAATCTTGAAGCAATTGCCAAGAGCCTTGTGGAAAAATGTGATGGACTACCTCTAGCACTTGTGGCTTTAGGTGGTAGCATGTCTTCTAAAAAGCTAGAATCTGAGTGGACAAAGGTTGATCGTAGCTTGAACTGGCAGCTAAGTAACAATCCTGAGCTTCAGAAAATGAAGTCAATCTTGTTATTAAGTTACTATGATTTGCCTTATAGATTGAAGCCTTGCTTCCTATATTGTTCCATTTTTCCTGAAGATTATTTGATGCAGACATCAGAGCTCATCAGGTTGTGGCTTGCGGAAGGATTTTTAGAAGAGATTGAAGGTCTAACACCAGAAGAAGTTGGTGAAACATACCTGATGGAACTTGTACGCAGGAGCTTGCTCCATGCGGTTCAAAGAAATCAACTTGGCCTGCCAGAAGAATTCAGGATGCACGATATACTACGGGACTTGGCTATTTCAATTTCGGCTAATGAGAGGTTCTCTACCATatggaaagatgaaaaagcaATTCAAGACCACCATGCTCCTATCTTGGCAATCCACGGAAATACTATGTCAAACTTGCATTACAACTTTTCAAAGGTTCGATCCTTCTTTATGTTCCTATCACCCTCAACTAAATTGCCTTCTGGGTTTAAATTCTTAAGGGTCTTAGATCTTAAAGGTTCCAATATCAACAAAGTTCCTTCTGATATCATGATCTGTTACAATCTAAGATGCCTAAACTTGGCTGAGACTAATGTGAAGGAGCTTCCAAAATCAATTGGACGACTCTGTCAGTTGCAAACTTTAGACCTCAGGCTTACTTACATTGAAGAACTTCCTTCTGGGGTTACCAGATTGCACAACTTACGTCATCTACTTGTGAGTCGCAAACGACGATTTGTACCTGGCAAATTTAACTCTGATTTGGGTGTAAAAGTGCCGCCAAATATTTGTAGGCTTGTGAACTTACAAGTTCTGAGCAACATTGAAGTAAATGGTGACCTTGTGAGAAAGTTCATGAACTTGAGTAATTTGAGAAGGCTTCGTCTCTCTCAGTTGACTGAAGAAGTTCAAAAGGACTTGTGCCTTGCCATTGAGACAATGGAACACCTACGTTATTTGGTTGTGCGGTCAATTGATGACCAAACTGTGTTACGTCTGGATTCACTATCATCGACACCTCCTCGTCTAAACATACTAAGACTTAATGGGAAGCTATGGAAGGTTCCTGGTTGGTTTCAATCTCTAGAGAACCTCATTGAATTGTCGTTGAACTGGACTAGGTCGCAAGAAGATTTCCTTCCTTACATAGAGGCACTGCCTAATTTGGAGACACTTTATTTGCGCAAAGCTTATATGGGAGAAAAGTTGTACTTTGGTAAAGGTTTCCAAAAGCTTATGACATTAAAAATACTTGATATGCCTCAATTGAAGCAAATTGTAGTCGAAGATGGGGTGATGCCAAGCATTCAGGGTCTTCATGTTGCCTTCTGTTCAAATTTAGAGACAATGTTTGGCATTGGCTATCTCAAATCTCTAGAGCAAGTGTATTTTAAAGATGTTTCTTATAAGCTACAGGACCACGTGCTCCAAAATTTGGAAAAGTCTGAGCACCAGCCCAAAGTTTTCTGGATCTG 2678 0.3921 MASAAVDLLIGKVVFFIESEASLLGNVADELREMQRELQSMRSFMVDTHSTLDESEQEKTWVAQVRDTAIMLQNIIDEFDYHKNKLKASKKSTRFFHQAIYFPQNLWIKHQVASKLKTMKTAINNISERKNRYKGENLSRETPSHVGPHDWLRIHHESPLFLRDDDVVGFDESKDKIMKLLVNEKQDHTVISIWGDGGSGKTTLVANVFNNLKTQEHFDCFAWITVSQRYGVQDIFRSMIKELCKSRNDQIPEDLSSLDSRSLVEKIVSYLQGKKYLVILDDIWSPDLWGDISIALPKGSQGSRAVLTTRFYAIASSSFGVQSHVHHIKPLNEAEALTLFCKKAFSNGCCPTNLEAIAKSLVEKCDGLPLALVALGGSMSSKKLESEWTKVDRSLNWQLSNNPELQKMKSILLLSYYDLPYRLKPCFLYCSIFPEDYLMQTSELIRLWLAEGFLEEIEGLTPEEVGETYLMELVRRSLLHAVQRNQLGLPEEFRMHDILRDLAISISANERFSTIWKDEKAIQDHHAPILAIHGNTMSNLHYNFSKVRSFFMFLSPSTKLPSGFKFLRVLDLKGSNINKVPSDIMICYNLRCLNLAETNVKELPKSIGRLCQLQTLDLRLTYIEELPSGVTRLHNLRHLLVSRKRRFVPGKFNSDLGVKVPPNICRLVNLQVLSNIEVNGDLVRKFMNLSNLRRLRLSQLTEEVQKDLCLAIETMEHLRYLVVRSIDDQTVLRLDSLSSTPPRLNILRLNGKLWKVPGWFQSLENLIELSLNWTRSQEDFLPYIEALPNLETLYLRKAYMGEKLYFGKGFQKLMTLKILDMPQLKQIVVEDGVMPSIQGLHVAFCSNLETMFGIGYLKSLEQVYFKDVSYKLQDHVLQNLEKSEHQPKVFWI 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01972 892 Pfam NB-ARC domain 172 416 IPR002182 GO:0043531
Bva09g01972 892 Gene3D - 330 415 IPR042197 -
Bva09g01972 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 430 IPR027417 -
Bva09g01972 892 Pfam Rx N-terminal domain 5 96 IPR041118 -
Bva09g01972 892 Gene3D Ribonuclease Inhibitor 531 886 IPR032675 -
Bva09g01972 892 Gene3D - 4 113 - -
Bva09g01972 892 PRINTS Disease resistance protein signature 270 284 - -
Bva09g01972 892 PRINTS Disease resistance protein signature 365 379 - -
Bva09g01972 892 PRINTS Disease resistance protein signature 190 205 - -
Bva09g01972 892 PRINTS Disease resistance protein signature 811 827 - -
Bva09g01972 892 Coils Coil 116 136 - -
Bva09g01972 892 CDD RX-CC_like 2 128 IPR038005 -
Bva09g01972 892 SUPERFAMILY L domain-like 494 878 - -
Bva09g01972 892 Gene3D - 416 505 IPR036388 -
Bva09g01972 892 PANTHER OS09G0479500 PROTEIN 17 877 - -
Bva09g01972 892 Gene3D - 158 320 IPR027417 -
Bva09g01972 892 PANTHER DISEASE RESISTANCE PROTEIN RP 17 877 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01972 Bva-Chr9 16019103 16023972 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01972 176 517 WRKY Transcription Factor Family AT5G45050 25.490 1.75e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01972 K13457 - csin:114322269 793.497