Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01956 ATGGTATCGCTGAGCTTCTCTTTGGATCACTTGATCCAGTTCATTGCTGATGAaactgatttatttttgggaatGAAATATAAAGTGAAATCATTTCGTAATCAGCTCATCTTGATAAGAGAGTACATCCGAATTTCTGGGTCTTCACCGGAGCTGAGTAACATTGAGAAGAAAGTCATCGATCAGATCCGAAGAATAGCTTTTGAAGCAGAGGATCTCATCAGTGATTACACCACTCATGCTGCAAGGCATAAAAAGTGGATTACTCGTCTCAGTTTCTACACAAGGGATCGTCAAGTGGCTTGGAAAATTGACAAACTCaacaatgaaattaaagaaattcttAAGAACAAGGAGATATATGCAAGTCCAGGTGATCATGGAAGAGAGCCAGAACTACCAGATCTTGATTTCCGGGTAAACAATGTTGTTGACTTTGTCAATGACATGGAAAAACTGGTGAATCTTCTGATCAAAGACGATGGTTTTCCTTATTATCGTGTGATTTCCGTAGTTGGCATGGGAGGGTCAGGCAAGACAGAACTTGCCTGGAAATTATTCGATGATGACAGGGTCAAGGAACACTTTGATTACTGGTTGTGGGTAAATCTTGATCAAGGAGACTCATCCACTGACATCCTGCGCCAAATGGTTAGTGAGCTGAAAATACAAGGCATGAATGACTCGCTGTTGCGTACTATGAATGACGATAATTTGAAGAGTTTACTGTCACAACATtttgaacaaaagaaatatctcGTTGTCATGGACAACATATGGCAAACTCAGACCTGGGATCAGCTGAAAGGGGCTTTTCCAAAAGACTCATACGGTAGCAGAATAGTCATCACCAGCCGCCAATTACCGGTTGTTCGATACACAAATTCTTCCATTCATTATGTCCCTCAGCTTGCTGATTCGGATAGCAGAGAACTTTTCTGTATGAAGGCCTTCGAAAGTGATCAATTTCCATATAATTTGGAAACTATGGTGGGGCAAGTTGTAAGGAGATGTCATGGTTTACCATTTCCCCTATTGGTACTGGGAAGGCTTTTGGCAGAGCAAGAAAGGGAGGAACAACCATGGTCAACTTTTTTAGGCAATCCTTTTTCCTATCCCGATGAAGGGAGGAGGCACTGGAGAGCAAAACTTGCTACAAGTTATGACCAGTTAATGCCTGTGAATTTGAAACTGTGCTTTTTCTATCTTGGCGTGTTCCCAGACAATCATGAGATTCCAGTGAAGCAATTGATTCAATTGTGGATAGCAGAGGAGCTCATCCCACAAAATGATGAAACAAGCTTGGAGAACATTGCAGAAAAGTACCTCCGTGAGTTGATTGATAGATGCTTGGTACAAGTCATAAGCTTGAGATTGGATGGAGGAGTAAAAACATGTTGTGTCCATAATGTTCTTCGGGACCTCTGCGTATGGGAGAGTAGGAACGATGACTTTATTGAGGTTCGTATGGATTCTAACTCAACATCGGAAAGCAAACCCAGAAGACTTTCTGTGCATTTTAGCCTCTTAGATTTCATCAATGTTTCATCAAGAAACTGTGAATGTGCCTCCATTCGTTCTTTCCTCTGCTTTTCCCAACAAAGTTGCTGTATGGATGATAATAACTGGACATGGCTTTGTCAAAAGATGAGGGTGATACGAGTGCTGAATTTGGAAAATGTGCAAGTGGAATTGATTCCTGAGGACATTGATGAGctgattcttttaaaatatctgaAGTTGAAAGGAAAGAACCTCAAAGTCCTCCCGGAATCCATTGGTAAGCTTTGGCAACTGGTGACACTTGACCTGAGAGGTTCTGCAGTGAATTGCTTACCAAGGGGGATTTGGAAACTGGAGAATCTAAGGCATTTGTGCTTGTCTAAGCCCACAAAACTACTTGATCCTCCACCAAATAATATGTCTGGGAGTTTGCCTAGCATTCAAGCCATTTCCAATTTAGTTCTAGACCAAGAGAGTACTCATCTCATTACAAAAGCCAAGTTTCCACTTGTGAAAAAATTAGGATTGTTTGTCAACAACGGAAATGATGTTTTCGAAAATGTCTGTAAGATAAGCTCTTTGAATAGATTGAAGATTGAAGCGCCTTCATCTGAGCATCTTGGTCTCCAGAATTCATTTTGCCAGCTTAGACTAACTAAGGTAACCTTGGTTAAGTCTAAGATCAACTCTAACTACCTTCGTGTCCTGGGACAACTTCCAGAACTTCGAATATTGAAACTGCTCGAAGTAAATTCAGATGACGACAATTTGCAATGTGATACTTGTAGTTTCGCCCAACTCGATGTCTTTCAAATGACACGCTTTCCAATTCAAAACTGGATACTTTCTGAAGGAGCTATGCCAAGCCTTCGGCGTTTGATCATCAAGGGGTGCCAGCAACTAAAGGGACTCCCAGAAAGGCAGCGCTTAATGAAATTGAAACAAGTTTGTGTGCATCGTCCATGTAGCTCTGAATTGATCACAACGCTTAACCGAATGAAGAGCAAGATAGGGGACTGGTGCGAAATTCAGATTTGTGATTG 2546 0.4034 MVSLSFSLDHLIQFIADETDLFLGMKYKVKSFRNQLILIREYIRISGSSPELSNIEKKVIDQIRRIAFEAEDLISDYTTHAARHKKWITRLSFYTRDRQVAWKIDKLNNEIKEILKNKEIYASPGDHGREPELPDLDFRVNNVVDFVNDMEKLVNLLIKDDGFPYYRVISVVGMGGSGKTELAWKLFDDDRVKEHFDYWLWVNLDQGDSSTDILRQMVSELKIQGMNDSLLRTMNDDNLKSLLSQHFEQKKYLVVMDNIWQTQTWDQLKGAFPKDSYGSRIVITSRQLPVVRYTNSSIHYVPQLADSDSRELFCMKAFESDQFPYNLETMVGQVVRRCHGLPFPLLVLGRLLAEQEREEQPWSTFLGNPFSYPDEGRRHWRAKLATSYDQLMPVNLKLCFFYLGVFPDNHEIPVKQLIQLWIAEELIPQNDETSLENIAEKYLRELIDRCLVQVISLRLDGGVKTCCVHNVLRDLCVWESRNDDFIEVRMDSNSTSESKPRRLSVHFSLLDFINVSSRNCECASIRSFLCFSQQSCCMDDNNWTWLCQKMRVIRVLNLENVQVELIPEDIDELILLKYLKLKGKNLKVLPESIGKLWQLVTLDLRGSAVNCLPRGIWKLENLRHLCLSKPTKLLDPPPNNMSGSLPSIQAISNLVLDQESTHLITKAKFPLVKKLGLFVNNGNDVFENVCKISSLNRLKIEAPSSEHLGLQNSFCQLRLTKVTLVKSKINSNYLRVLGQLPELRILKLLEVNSDDDNLQCDTCSFAQLDVFQMTRFPIQNWILSEGAMPSLRRLIIKGCQQLKGLPERQRLMKLKQVCVHRPCSSELITTLNRMKSKIGDWCEIQICD 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01956 848 CDD RX-CC_like 2 114 IPR038005 -
Bva09g01956 848 PANTHER - 53 837 - -
Bva09g01956 848 Gene3D - 3 120 - -
Bva09g01956 848 PANTHER DISEASE RESISTANCE PROTEIN RP 53 837 IPR044974 GO:0006952
Bva09g01956 848 Gene3D Ribonuclease Inhibitor 531 836 IPR032675 -
Bva09g01956 848 SUPERFAMILY L domain-like 468 820 - -
Bva09g01956 848 Gene3D - 303 387 IPR042197 -
Bva09g01956 848 PRINTS Disease resistance protein signature 246 260 - -
Bva09g01956 848 PRINTS Disease resistance protein signature 168 183 - -
Bva09g01956 848 PRINTS Disease resistance protein signature 786 802 - -
Bva09g01956 848 PRINTS Disease resistance protein signature 338 352 - -
Bva09g01956 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 403 IPR027417 -
Bva09g01956 848 Gene3D - 131 301 IPR027417 -
Bva09g01956 848 Pfam Rx N-terminal domain 4 88 IPR041118 -
Bva09g01956 848 Pfam NB-ARC domain 149 366 IPR002182 GO:0043531
Bva09g01956 848 Gene3D - 388 478 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01956 Bva-Chr9 15788250 15791746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01956 149 366 WRKY Transcription Factor Family AT5G45050 26.818 9.61e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01956 - - qsu:112030752 486.878