LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva09g01956	ATGGTATCGCTGAGCTTCTCTTTGGATCACTTGATCCAGTTCATTGCTGATGAaactgatttatttttgggaatGAAATATAAAGTGAAATCATTTCGTAATCAGCTCATCTTGATAAGAGAGTACATCCGAATTTCTGGGTCTTCACCGGAGCTGAGTAACATTGAGAAGAAAGTCATCGATCAGATCCGAAGAATAGCTTTTGAAGCAGAGGATCTCATCAGTGATTACACCACTCATGCTGCAAGGCATAAAAAGTGGATTACTCGTCTCAGTTTCTACACAAGGGATCGTCAAGTGGCTTGGAAAATTGACAAACTCaacaatgaaattaaagaaattcttAAGAACAAGGAGATATATGCAAGTCCAGGTGATCATGGAAGAGAGCCAGAACTACCAGATCTTGATTTCCGGGTAAACAATGTTGTTGACTTTGTCAATGACATGGAAAAACTGGTGAATCTTCTGATCAAAGACGATGGTTTTCCTTATTATCGTGTGATTTCCGTAGTTGGCATGGGAGGGTCAGGCAAGACAGAACTTGCCTGGAAATTATTCGATGATGACAGGGTCAAGGAACACTTTGATTACTGGTTGTGGGTAAATCTTGATCAAGGAGACTCATCCACTGACATCCTGCGCCAAATGGTTAGTGAGCTGAAAATACAAGGCATGAATGACTCGCTGTTGCGTACTATGAATGACGATAATTTGAAGAGTTTACTGTCACAACATtttgaacaaaagaaatatctcGTTGTCATGGACAACATATGGCAAACTCAGACCTGGGATCAGCTGAAAGGGGCTTTTCCAAAAGACTCATACGGTAGCAGAATAGTCATCACCAGCCGCCAATTACCGGTTGTTCGATACACAAATTCTTCCATTCATTATGTCCCTCAGCTTGCTGATTCGGATAGCAGAGAACTTTTCTGTATGAAGGCCTTCGAAAGTGATCAATTTCCATATAATTTGGAAACTATGGTGGGGCAAGTTGTAAGGAGATGTCATGGTTTACCATTTCCCCTATTGGTACTGGGAAGGCTTTTGGCAGAGCAAGAAAGGGAGGAACAACCATGGTCAACTTTTTTAGGCAATCCTTTTTCCTATCCCGATGAAGGGAGGAGGCACTGGAGAGCAAAACTTGCTACAAGTTATGACCAGTTAATGCCTGTGAATTTGAAACTGTGCTTTTTCTATCTTGGCGTGTTCCCAGACAATCATGAGATTCCAGTGAAGCAATTGATTCAATTGTGGATAGCAGAGGAGCTCATCCCACAAAATGATGAAACAAGCTTGGAGAACATTGCAGAAAAGTACCTCCGTGAGTTGATTGATAGATGCTTGGTACAAGTCATAAGCTTGAGATTGGATGGAGGAGTAAAAACATGTTGTGTCCATAATGTTCTTCGGGACCTCTGCGTATGGGAGAGTAGGAACGATGACTTTATTGAGGTTCGTATGGATTCTAACTCAACATCGGAAAGCAAACCCAGAAGACTTTCTGTGCATTTTAGCCTCTTAGATTTCATCAATGTTTCATCAAGAAACTGTGAATGTGCCTCCATTCGTTCTTTCCTCTGCTTTTCCCAACAAAGTTGCTGTATGGATGATAATAACTGGACATGGCTTTGTCAAAAGATGAGGGTGATACGAGTGCTGAATTTGGAAAATGTGCAAGTGGAATTGATTCCTGAGGACATTGATGAGctgattcttttaaaatatctgaAGTTGAAAGGAAAGAACCTCAAAGTCCTCCCGGAATCCATTGGTAAGCTTTGGCAACTGGTGACACTTGACCTGAGAGGTTCTGCAGTGAATTGCTTACCAAGGGGGATTTGGAAACTGGAGAATCTAAGGCATTTGTGCTTGTCTAAGCCCACAAAACTACTTGATCCTCCACCAAATAATATGTCTGGGAGTTTGCCTAGCATTCAAGCCATTTCCAATTTAGTTCTAGACCAAGAGAGTACTCATCTCATTACAAAAGCCAAGTTTCCACTTGTGAAAAAATTAGGATTGTTTGTCAACAACGGAAATGATGTTTTCGAAAATGTCTGTAAGATAAGCTCTTTGAATAGATTGAAGATTGAAGCGCCTTCATCTGAGCATCTTGGTCTCCAGAATTCATTTTGCCAGCTTAGACTAACTAAGGTAACCTTGGTTAAGTCTAAGATCAACTCTAACTACCTTCGTGTCCTGGGACAACTTCCAGAACTTCGAATATTGAAACTGCTCGAAGTAAATTCAGATGACGACAATTTGCAATGTGATACTTGTAGTTTCGCCCAACTCGATGTCTTTCAAATGACACGCTTTCCAATTCAAAACTGGATACTTTCTGAAGGAGCTATGCCAAGCCTTCGGCGTTTGATCATCAAGGGGTGCCAGCAACTAAAGGGACTCCCAGAAAGGCAGCGCTTAATGAAATTGAAACAAGTTTGTGTGCATCGTCCATGTAGCTCTGAATTGATCACAACGCTTAACCGAATGAAGAGCAAGATAGGGGACTGGTGCGAAATTCAGATTTGTGATTG	2546	0.4034	MVSLSFSLDHLIQFIADETDLFLGMKYKVKSFRNQLILIREYIRISGSSPELSNIEKKVIDQIRRIAFEAEDLISDYTTHAARHKKWITRLSFYTRDRQVAWKIDKLNNEIKEILKNKEIYASPGDHGREPELPDLDFRVNNVVDFVNDMEKLVNLLIKDDGFPYYRVISVVGMGGSGKTELAWKLFDDDRVKEHFDYWLWVNLDQGDSSTDILRQMVSELKIQGMNDSLLRTMNDDNLKSLLSQHFEQKKYLVVMDNIWQTQTWDQLKGAFPKDSYGSRIVITSRQLPVVRYTNSSIHYVPQLADSDSRELFCMKAFESDQFPYNLETMVGQVVRRCHGLPFPLLVLGRLLAEQEREEQPWSTFLGNPFSYPDEGRRHWRAKLATSYDQLMPVNLKLCFFYLGVFPDNHEIPVKQLIQLWIAEELIPQNDETSLENIAEKYLRELIDRCLVQVISLRLDGGVKTCCVHNVLRDLCVWESRNDDFIEVRMDSNSTSESKPRRLSVHFSLLDFINVSSRNCECASIRSFLCFSQQSCCMDDNNWTWLCQKMRVIRVLNLENVQVELIPEDIDELILLKYLKLKGKNLKVLPESIGKLWQLVTLDLRGSAVNCLPRGIWKLENLRHLCLSKPTKLLDPPPNNMSGSLPSIQAISNLVLDQESTHLITKAKFPLVKKLGLFVNNGNDVFENVCKISSLNRLKIEAPSSEHLGLQNSFCQLRLTKVTLVKSKINSNYLRVLGQLPELRILKLLEVNSDDDNLQCDTCSFAQLDVFQMTRFPIQNWILSEGAMPSLRRLIIKGCQQLKGLPERQRLMKLKQVCVHRPCSSELITTLNRMKSKIGDWCEIQICD	848

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva09g01956	848	CDD	RX-CC_like	2	114	IPR038005	-
	Bva09g01956	848	PANTHER	-	53	837	-	-
	Bva09g01956	848	Gene3D	-	3	120	-	-
	Bva09g01956	848	PANTHER	DISEASE RESISTANCE PROTEIN RP	53	837	IPR044974	GO:0006952
	Bva09g01956	848	Gene3D	Ribonuclease Inhibitor	531	836	IPR032675	-
	Bva09g01956	848	SUPERFAMILY	L domain-like	468	820	-	-
	Bva09g01956	848	Gene3D	-	303	387	IPR042197	-
	Bva09g01956	848	PRINTS	Disease resistance protein signature	246	260	-	-
	Bva09g01956	848	PRINTS	Disease resistance protein signature	168	183	-	-
	Bva09g01956	848	PRINTS	Disease resistance protein signature	786	802	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva09g01956	Bva-Chr9	15788250	15791746	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva09g01956	149	366	WRKY Transcription Factor Family	AT5G45050	26.818	9.61e-08	54.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva09g01956	-		-	qsu:112030752	486.878

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