Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01941 ATGGCTTTTCTCTTTAATCACACAAGCTTCCGCTACCTCtgtattatttccttttactttcttgcttcttttctAACCATAAATTCACTCTCTACTGTTTCCATTTCTGAAACATCGAATCGAACATTAATCTGTGCATTACAAGGTCAAAGTTACCCACGAGCCCATTTTCTCAACTGTACAAGCTTTCCTTCTTCGTCAATTCAAATTCCCCTGAACCCCAATACGCGATTTTCTGAGATTGTTGGAGGAAATGGGTTTCTATGCGCATTAACACCAAAATCTTCCTCTTCCGAATCAGTCATGGTATGCTGGAGATTCAATGAAGTTGCTAGTAATGTTACCTATAAGCGTATATATCATGGGCCACTTATCAAAAATCTCGATTCTTCCTACTCACATTTATGTGGCCTAGAAAGAGTTACTAATCGCCTTAAATGTTGGCAATGGCCTAGATTCAATCAACGCATGGATCTGAGGTTTTCCAGCATAGCAGTGGGAGAGGATTTTGTTTGTGGGATATTGGAATGGGGAAACATTGCTTGCATGACTAGGAATGGCAGTGTTATTGGCAATGAACCAAAGGGGAATTACACAGTAATTGGTGCTGCTTCAAGGTATGCTTGCGCCATTTCTGTTGATGGTAGATTGGATTGTTGGGGGAACATGTCAGGGCAAATACCCCAAGAAAAGTTCAGTTCATTGGCTTTGGGAGAGAATAGAAGTTGTGCTCTTGGGCTTGATAGAAGAGTTATTTGCTGGGGTTGGGGggcagaaaataatttcagcATGCCACAGAGCTTGCAGGGTACCAAATTTTTAGCAATTGAAGCCAAGAAGAGAGTGTTCTGTGGAATTTTATATGATGATTATTCTCTGCAATGTTGGGGTAGTGAGATTATTAATCCAAATCACACGGTGTTTGATAATGTCCTCCCTGGTCCATGTAGGAACCAAGATCAATGTCCATGTGAAGCAATTCCAGGTTCTGCAAGATTCTGTGACCAGGGTGTCATTTGCAAGCCTTGTGACAATGACACTCTTACAGGTCCAGCACCATgccaaaatgaaaacaatggCTGGAGCAAGAAAATGGTGGTATTTGTAGTTGTTGGGTGTGTCGGTTCCATTTGCTGGTTACTCATTGTGGCTTTCCTCCTTTACCAATACTGCAAGGATAGAGTATGCCGGGTCCACAATTCCGGCCGGTTAGACGAGACAGCGGATGCTGCAAATCTACCAGAAGTGCCACAAGCTCAACCAGTGCCTGCAGTTCTAGAGAAGAGGTTGAGCCATATAATCAGCATGGGAAATGGTGGAGGCCATTTAGaggagtttcctttgaaacttctccaacAAGTCACCAACAATTTCTCAGATGAGCACAAAATTGGGACAGGTAGTTTTGGCTCAGTGTACCATGCCACACTTGAAGATGGGAAAGAAATTGCCATAAAGAGAGCTGAAATCTCTTCCACCTCTCAATCATATGCAATTTTAGGTGGCACCAATCGCCAAGAAGACAAAGACAGTGCCTTTGTCAATGAGCTTGAATCCCTATCAAGACTCAACCACAAGAACCTCGTTCGTTTGTTGGGTTTTTTTGAAGACAGCAGCGAACGAATTTTGGTCTATGAGTACATGAATAATGGTAGCTTAATTGATCATCTCCACAACGACAAGCTCCCTAACCATGATTCTCCTCTCATGTCATGGATAGGGAGAATTAAGGTAGCTTTAGATGCAGCAAGAGGCATACAATACCTTCACGAATACGCAACTCCACCAATCATTCATCGCGATATTAAGTCGTCAAATATATTACTCGATGCCAAATTTACAGCCAAAGTGTCTGATTTTGGCCTATCACAAATGGGTTCAGAAGATAAAGAGTCACATCTTTCACTCCATGCAGTTGGCACATTTGGATACATGGACCCCGAGTATTATAGACTTCAATACTTGACAACAAAGagtgatatatatagttttggtGTTGTTTTGTTAGAATTATTAACCGGGAATAAAGCCAtccacaaaaatgaaaaggggGTGCCAAGAAATCTGGTGGATTTCATGGTACCTTACATTGTTCATGCTGAAATTCACAGGGTTTTAGACCCAAGAATTCCACCACCAACACCATATGAGATAGAAGCAGTGGCATATGTGGGTTATTTAGCTGGAGATTGTGTGAGATTAGAAGGTAGGGAGAGGCCAACCATGTCTATAATTGTAAATAACTTGGAAAAAGCGTTGGCGGCCTGTGTGGCCCAACCGGTGGTACTATCACGGTCCACGACTGATTCTTCCGCGTATTA 2321 0.4007 MAFLFNHTSFRYLCIISFYFLASFLTINSLSTVSISETSNRTLICALQGQSYPRAHFLNCTSFPSSSIQIPLNPNTRFSEIVGGNGFLCALTPKSSSSESVMVCWRFNEVASNVTYKRIYHGPLIKNLDSSYSHLCGLERVTNRLKCWQWPRFNQRMDLRFSSIAVGEDFVCGILEWGNIACMTRNGSVIGNEPKGNYTVIGAASRYACAISVDGRLDCWGNMSGQIPQEKFSSLALGENRSCALGLDRRVICWGWGAENNFSMPQSLQGTKFLAIEAKKRVFCGILYDDYSLQCWGSEIINPNHTVFDNVLPGPCRNQDQCPCEAIPGSARFCDQGVICKPCDNDTLTGPAPCQNENNGWSKKMVVFVVVGCVGSICWLLIVAFLLYQYCKDRVCRVHNSGRLDETADAANLPEVPQAQPVPAVLEKRLSHIISMGNGGGHLEEFPLKLLQQVTNNFSDEHKIGTGSFGSVYHATLEDGKEIAIKRAEISSTSQSYAILGGTNRQEDKDSAFVNELESLSRLNHKNLVRLLGFFEDSSERILVYEYMNNGSLIDHLHNDKLPNHDSPLMSWIGRIKVALDAARGIQYLHEYATPPIIHRDIKSSNILLDAKFTAKVSDFGLSQMGSEDKESHLSLHAVGTFGYMDPEYYRLQYLTTKSDIYSFGVVLLELLTGNKAIHKNEKGVPRNLVDFMVPYIVHAEIHRVLDPRIPPPTPYEIEAVAYVGYLAGDCVRLEGRERPTMSIIVNNLEKALAACVAQPVVLSRSTTDSSAY 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01941 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Bva09g01941 773 PANTHER OJ000114_01.11 PROTEIN 25 771 - -
Bva09g01941 773 SUPERFAMILY Protein kinase-like (PK-like) 440 749 IPR011009 -
Bva09g01941 773 CDD STKc_IRAK 464 751 - -
Bva09g01941 773 ProSitePatterns Protein kinases ATP-binding region signature. 464 486 IPR017441 GO:0005524
Bva09g01941 773 Gene3D - 38 189 IPR009091 -
Bva09g01941 773 Pfam Protein kinase domain 459 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01941 773 ProSiteProfiles Protein kinase domain profile. 458 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01941 773 SMART serkin_6 458 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01941 773 Gene3D Phosphorylase Kinase; domain 1 434 547 - -
Bva09g01941 773 SUPERFAMILY RCC1/BLIP-II 116 299 IPR009091 -
Bva09g01941 773 Gene3D Transferase(Phosphotransferase) domain 1 548 761 - -
Bva09g01941 773 Gene3D - 190 305 IPR009091 -
Bva09g01941 773 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 25 771 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01941 Bva-Chr9 15566906 15569460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01941 29 768 Receptor kinase-like Gene Family AT5G47850 51.515 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva09g01941 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01941 - - jre:108987657 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01941 09 15566906 15569460 Bva09g01941 09 15566906 15569460 ECH