Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01919 ATGGCTTTTCCTATTCAtgaagcttcttcttcttcggcTCCTTCTCCTTCTTATTCTTCCTATCCTTTTGATTCAACATCCCAATGGGATTACCAAGTGGaatgtaagaaaattttgggcCATGAAATTATTCCAATCTTCTATGAGGTGGATCCCTCTGACGTGAGAAACCAGAGGAAGTCGTTTGCAGAAGCTTTCAGAAAACACGAGGAAAAGTTTGGAGCAGACAAAGAGAAGGTGCGGAGATGGAGAGATTCCTTAAGGGAAGTTGCCAATATCTCTGGTTGGCACTCCAAGGATTGGGCTGAGGCAGAGCTGATTGAATGCATTGTTAGAGATCTGTACAGAAAGCTGCAGCCAAATCTAAACGACAATGACTTGTGGATGCATGATTTGCTTCAAGAAATGGGCAAGAACATTGTTTTTCTAGAATCTCCTGAAAATCCTGGAAAACACAGTCGGTTGTGGTCAATTgatgatattaataatattttggtaaaaaaaaagGGTACTGAAGCAATTCAAGGCATAGTGTTGGACTTACCTCGAGGATATGAAACAGATGAAAGAGGAGCTTTAGACTTACCTCAAGGATATGAAGCATGCTTACACCCTAATGCTTTCTCAAAGGCAAGACAAGTGAAACTACTAAAGTTGTGTAAGATGCTACTTTCCCATGGCCTCAATTGTCTTCCTAGTGCACTAAAAGTTCTTGATTGGACAGAGTGTCCTTTAAAGTCTCTGCCACTTACCATTGAACTCGATGAACTTGTTAATCTCAAATTGTGTTGTAGTAAACTTGAAACACTTTGGAATGGAGCAAAGtttcttgTAAGTTTGAAGTCCATCGATATGAGTTTTTCCAAGAACTTAACTGGAATTCTAGATATTTCTGGTGTTccaaatctggaaaaattgGTTTTGGAAGGTTGTGAAGGCCTATTGAAAGTTCATCCATCTCTTGGACTCCACGGGAGTCTTGTTCTAGTGAACTTTAAAGATTGTAAGAATCTTAAATACCTTCCTAGTAAACTTGAAATGAGTTCAATGGAGGATTTGATTCTTTCTGGCTGCTCCAAAGTTAAGCAGCTTCCAGAGTTTGGGGAAAGCATGGAACATCTATCAAGTCTCACTTTGTCGGGAACTTA 1148 0.3693 MAFPIHEASSSSAPSPSYSSYPFDSTSQWDYQVECKKILGHEIIPIFYEVDPSDVRNQRKSFAEAFRKHEEKFGADKEKVRRWRDSLREVANISGWHSKDWAEAELIECIVRDLYRKLQPNLNDNDLWMHDLLQEMGKNIVFLESPENPGKHSRLWSIDDINNILVKKKGTEAIQGIVLDLPRGYETDERGALDLPQGYEACLHPNAFSKARQVKLLKLCKMLLSHGLNCLPSALKVLDWTECPLKSLPLTIELDELVNLKLCCSKLETLWNGAKFLVSLKSIDMSFSKNLTGILDISGVPNLEKLVLEGCEGLLKVHPSLGLHGSLVLVNFKDCKNLKYLPSKLEMSSMEDLILSGCSKVKQLPEFGESMEHLSSLTLSGT 382
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01919 382 Gene3D - 15 124 IPR035897 -
Bva09g01919 382 ProSiteProfiles TIR domain profile. 1 118 IPR000157 GO:0007165
Bva09g01919 382 MobiDBLite consensus disorder prediction 1 20 - -
Bva09g01919 382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 116 IPR044974 GO:0006952
Bva09g01919 382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 123 377 IPR044974 GO:0006952
Bva09g01919 382 Gene3D Ribonuclease Inhibitor 202 381 IPR032675 -
Bva09g01919 382 Pfam Leucine Rich Repeat 257 275 IPR011713 -
Bva09g01919 382 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 26 116 - -
Bva09g01919 382 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 96 IPR035897 -
Bva09g01919 382 Pfam TIR domain 30 124 IPR000157 GO:0007165
Bva09g01919 382 SUPERFAMILY L domain-like 193 381 - -
Bva09g01919 382 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 123 377 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva09g01919 Bva-Chr9 15110686 15113577 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01919 119 374 WRKY Transcription Factor Family AT4G12020 36.397 1.60e-34 134