Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01911 AGGAAGTCGTTTGCAGAAGCTTTCAGAAAGCACGAGGAAAAGTTTGGAGCAGACAAAGAGAAGGTGCGGAGATGGAGATATTCCTTAAGGGAAGTTGCCAATATCTCTGGTTGGGACTCCAAGGATTGGGCTGAAGCAGAGCTGATTGAATGCATTGTTAGAGATCTGTACAGAAAAGTGCAGCCAAATCTAAATGGCAATGACTTGTGGATGCATGATTTGCTTCAAGAAATGGGCAAGAACATTGTTTTTCTAGAATCTCCTGAAAATCCTGGAAAACGTAGTCGATTGTGGTCAATTActgatattaataatattttggcaAAAAATAAGgGTACTAAAGCAATTCAAGGCATAGTGTTGTACTTTCCTCGAGGATTTGAAACAAATGAAACAAGAGCTTTAGACTTACTTCGAGCATATGAAACAGATGAAAGACGAGCTTTAGACTTACTTCAAGGATATGAAACAGGTGAAAGACGAGCTTTAGACTTACCTCAAGGGTATGAAGCATGCTTACACCCAGATGCTTTCTCAAAGGCAAGTCAAGTGAAATTACTAAAGTTGTGTAAGATGCAACTTCCCCATGGCCTCAATTGTCTTCCTAGTGCACTAAAAGTTCTTGATTGGACAGAGTGTCCCTTAAAGTCTCTGCCACTTACCATTGAACTTGATGAACTTATTAATCTCAAATTGCGTCGTAGTAAACTTGAAACACTTTGGAATGGGACAAAGtttcttgGAAGCTTGAAGTCCATCGATATGAGTTTTTCCATGAACGTAACTGGAATTCCAGATATTTCCGGAGTTCCAAATCTTGAAAAATTGGTTTTGGAAGGCTGTGAAGGCCTATTGAAAGTTCATCCATCTCTTGGACTCCACAGGAGTCTTGTTCTAGTGAGCTTTAAAGATTGTAAGAACCTTAAATACCTTCCTAGTAAACTTGAAATGAGTTCAATGGAGGATTTGATTCTTTCAGGCTGCTCCAAAGTTAAGCAGCTTCCAGAGTTTGGGGAAAGCATGGAACATCTATCAAGTCTCACTTTGTCGGGAACTTCCATAGAAGAACTGCCCTTATCTCTTGGATGTTTAATTGGCCTTGATGTTTTAAACTTACAGGATTGCAAGAATCTTTGTTGCCTTCCAAGTactattcaaaatttaaagtctCTCAGGATTCTCAATATCTCCGGTTGCTCAAGACTTTCTCGATTGccagaaaatttgaaagaaatcaaGAGCTTGATGGAAGTTAATGCAAGTGGAACTGCTATTGCAGAAGTACCATCTTGCATCTTGGATCTAGAACACCTTCAGAAATTATCCTTTGAGGGTTGCAAACGGTTAGAGTCGAAGACATGGATTAATTGGCTTTTGGAACTTTGGAGTATTCCTCAAGTTCCCATGGATTTCAGTTTCAGGCTACCTCGTTCATTCTCTACTCTCCCCATGTTGcgaatattaaatttaagttattgcaACCTCTCAGAAGGATCAATCCCTGGTGATATTGAatgcttatattttttggaGAGGTTAGATCTAAGTGGCAACAATTTTATTAGCCTACCTAACAGCATTTCTGAACTTTCTATGCTGAAGTTTCTTCACATAAATTGCTGTAAGAGGCTTCAATCATTGCCAGAACTTCCATCCAAATTAGAAGTATTAGATGCACGCAATTCTACTTCACTGAAAACATTCAAATCCAATTTTTCAAAGCAATGCAGTCTTGTCCCATGGAGTAAGAATTGGATCTTCAATGAAAACTACAATACTAGAGACAGTTATTCTACATTgaatttttggaaaagaaaatcaatttattttcccGTCGGAAGAGTTGACTTAAGTTATAGATTGCTCGTGGAAGATGACATGCTTCAGGAACGTTTGCTCgcacaaaaatttcatattactATACCAGGTGATAAGATTCCATCTTGGTTCGACactcaaaattcttcttctttggcaACACTACGACTACAATTTCCTCATAATTGTTCTCTGACACAATGGGTAGGAATTGCTTTCAGTTGTGTATTAGTATATAAGGGTTACTCATATTTCCGTAGGTCTTATCATGgttataatatttgttatgaTATGGATGGTGTACAATTCGAATTACCTGCTGTTGGGAGTGTCGGACCTCGTGGTGAGCCAAATCAGCctcatttatctattatttatatgtctGCTATAAAATTACGcgaaagaatttataaaaacaatgattgtagagaaattgaatttagatttgatACAAGGGGCTTGAATGTCTCTTCGAAAATATTTGGGCGTGGTGACAGAGAATGTTTGGAAGTAATAGGGTGTGGTGGTCGTCTGGTATATGACCAAGATTTTGAAGATTGGAACAAAACAATATGGGCAATGCAACAATA 2408 0.3501 MGKNIVFLESPENPGKRSRLWSITDINNILAKNKGTKAIQGIVLYFPRGFETNETRALDLLRAYETDERRALDLLQGYETGERRALDLPQGYEACLHPDAFSKASQVKLLKLCKMQLPHGLNCLPSALKVLDWTECPLKSLPLTIELDELINLKLRRSKLETLWNGTKFLGSLKSIDMSFSMNVTGIPDISGVPNLEKLVLEGCEGLLKVHPSLGLHRSLVLVSFKDCKNLKYLPSKLEMSSMEDLILSGCSKVKQLPEFGESMEHLSSLTLSGTSIEELPLSLGCLIGLDVLNLQDCKNLCCLPSTIQNLKSLRILNISGCSRLSRLPENLKEIKSLMEVNASGTAIAEVPSCILDLEHLQKLSFEGCKRLESKTWINWLLELWSIPQVPMDFSFRLPRSFSTLPMLRILNLSYCNLSEGSIPGDIECLYFLERLDLSGNNFISLPNSISELSMLKFLHINCCKRLQSLPELPSKLEVLDARNSTSLKTFKSNFSKQCSLVPWSKNWIFNENYNTRDSYSTLNFWKRKSIYFPVGRVDLSYRLLVEDDMLQERLLAQKFHITIPGDKIPSWFDTQNSSSLATLRLQFPHNCSLTQWVGIAFSCVLVYKGYSYFRRSYHGYNICYDMDGVQFELPAVGSVGPRGEPNQPHLSIIYMSAIKLRERIYKNNDCREIEFRFDTRGLNVSSKIFGRGDRECLEVIGCGGRLVYDQDFEDWNKTIWAMQQ 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01911 725 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 271 597 IPR044974 GO:0006952
Bva09g01911 725 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 50 IPR044974 GO:0006952
Bva09g01911 725 SUPERFAMILY L domain-like 84 374 - -
Bva09g01911 725 SUPERFAMILY L domain-like 305 481 - -
Bva09g01911 725 Gene3D Ribonuclease Inhibitor 83 238 IPR032675 -
Bva09g01911 725 ProSiteProfiles Leucine-rich repeat profile. 432 453 IPR001611 GO:0005515
Bva09g01911 725 SMART LRR_typ_2 405 429 IPR003591 -
Bva09g01911 725 SMART LRR_typ_2 264 287 IPR003591 -
Bva09g01911 725 SMART LRR_typ_2 430 453 IPR003591 -
Bva09g01911 725 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 50 - -
Bva09g01911 725 Pfam C-JID domain 564 713 IPR045344 -
Bva09g01911 725 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 82 279 - -
Bva09g01911 725 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 82 279 IPR044974 GO:0006952
Bva09g01911 725 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 271 597 - -
Bva09g01911 725 Gene3D Ribonuclease Inhibitor 239 384 IPR032675 -
Bva09g01911 725 Gene3D Ribonuclease Inhibitor 385 502 IPR032675 -
Bva09g01911 725 Pfam Leucine Rich Repeat 150 168 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01911 Bva-Chr9 14976670 14981177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01911 293 480 WRKY Transcription Factor Family AT4G12020 33.000 9.65e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01911 - - gmx:100815486 555.444