Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01910 ATGGCTTTTACCGCCGacgcttcttcttcttcttgtcctTCTGATTCAACCCCACAATGGGACTACCAAGTTTTCTTGAGCTTCAGGGGAGAAGACACCCGCAAAGGATTCACAAGCCATTTGTATGCTTCACTGAATCACAAGGGAATCACCACTTTCAAGGATGACAAAGAATTGGAGAGAGGAGATGTTATCTCATCAGAAATCATCAAGGCAATTGAAGGGTCTATGTTTGCAGTCATCGTTCTCTCCCCAAACTATGCTTTTTCCACATGGTGTTTGGATGAACTCCAAAAGATTGTGGaatgtaagaaaattttgggcCATGAAATTATTCCAATCTTCTATGGGGTGGATCCCTCTGATGTGAGAAACCAGAGGAAGTCGTTTGCAGAAGCTTTCAGAAAACATGACGAAAGGTTCGGAGCAGACAAAGAGAAGGTGCGGAGATGGAGAGATTCCTTAAGGGAAGTTGCCAATATCTCTGGTTGGGACTCCAAGGATTGGGCTGAAGCAGAGTTGATTGAATGCATTGTTAGAGATCTGTACAGAAAACTACAGCCAAAACGTAGTAGGTTGTGGTCACTAAATGATGTTAATAGTGTATTGGTAAAAAATAAGgGAACTGAAGCAATTCAAAGCATAGTGTTGGACTTACCTCGAGGATATGAGGAAGATGATGGAATAGCTTTGACCTTACCTCAAGGATATGAAGCATGCTTACACCCAGATGCCTTCTCAAAGACAACCCAGTTGAAATTACTCAAGTTGTGCAAGATGCAACTTCCCCGTGGCCTCAATTGTCTTCCTAGTGCACTAAAAGTTCTTGACTGGATACAATGTCCTTTGAAATCTCTGCCACTTACCGTTGAACTTGATGAACTTGTTGATCTCAAATTGTGTCACAGTAAACTTAAACAACTTTGGAATGGAACAAAGTTTCTAGTATGTTTGAAGTTCATCGACATGAGTTTTTCCAAGAACCTAACCAGAGTGCCAGACATTTCTGGAGTTCCAAATCTAGAAAGCTTGGTTTTGGAAGGTTGTAAAAGCTTATTTGAAGTTCATCCATCTCTTGGACTACATAGAAAGCTTGTTCTAGTGACTTTTGAAGATTGTAGAAATCTTAAATATCTTCCAGGTAAACTGGAAATGAGTTCAATGGAGCATTTGATTCTTTCTGGATGTTCCAAAGTTAAACAGCTACCGGAGTTTGGGGGAAGCATGCTAAAATTATCAACTCTTTCTTTAGAGGGAACTTCCATAAAAGAACTGCCCTTATCAGTTGGATGTCTGATTGGCCTTCTTGTTTTGAAGTTAAAGGATTGCAAGAATCTTTGTTGCCTTCCAAGTactattcaaaatttgaagtccCTCAGGATTCTCAATATATCTGGATGCTCAAAACTTTCTCGATtgccagaaaatttgcaagaaATCAAGAGTTTGACCGAACTTAATGCAAGTGGAACTGCTATTGAAGAAGTAACTTCGTGCATCTTGCCAGAAAACCTTGAAGTATTATCCTTTAAGGGTTGCAAGTCCAGGTCATGGGATTGGCTTCTAGACTTTTGGAGTACTCCTCAAGAGCCCGAAGGCTTCAGGTTACCTCATTCATTCTCAGCTTTCTCCTCATTGcgaatattaaatttaagttattgcaATCTCTCAGATGGATCAATCCCTGGTGATATTGAATTCTTATCATTATTGTTGAGCTTGGATCTAAGTGGCAACAATTTTACATGCCTACCTAACAGCATTTCTGAACTTTCTATGCTGACCCATCTTCACCTAAATTGCTGTAAGAGGCTCCAATCATTGCCAGAACTTCCACTAGGAATAGAAGTATTAGGAGCATGCAATTCCACTTCACTGGAAACTTTCGAATCTAATTCTTCAAAGCAGTGTAGTCTTGTCCCATGGAGTAAGAAACATTACTATTGTAGAGGCAGATCTTTTACACTACGAGGATCCAAAAAAGTTACCTCAGAACCAGGCAGTTTTAACTTATGGAGTAAGGGGTGGATCTTTGAAGAGAATAACATTTATCAGGAAGACAATATGCTCAGAACAAGATTTCAGATGCTTATACCAAGTGATAAGATTCCATCTTGGTATGacactaaaaataattcttcttctttggcaACACTACGACTACGAATCCCTCATAGTTGGCCTATGACTGAATGGGTGGGAATTGCTTTCAGTTGTTTATTAGTACGCAAGGTTTATCCATCGAAACTGTATTCTAATTTTGGTCATGGCATTTCTTATAAAATGGAAGATGGACTAAAATACAATGTTTTTTCTTGGAGTTGGGGTCCTCCTAGTGAGCCAAGTCAGCCTCACCTTTCTATTATCTATATGTCTGCTAAAGGATTCCGTGACAAGATTTATGAAGACAGTGATTGTAATGAAATTGAGTTTAGGTTTCAGACAAAAGGCGACAGTGAAGGGATGGGAATAAGAGGTGATGATGAGTTAGAAGTAATAGGGTGTGGTGGTCGTTTGGTATATGAGCAAGATTTTGAAGATTGGAACAAAACAATTTGGTCAATGCAACAATA 2573 0.3766 MAFTADASSSSCPSDSTPQWDYQVFLSFRGEDTRKGFTSHLYASLNHKGITTFKDDKELERGDVISSEIIKAIEGSMFAVIVLSPNYAFSTWCLDELQKIVECKKILGHEIIPIFYGVDPSDVRNQRKSFAEAFRKHDERFGADKEKVRRWRDSLREVANISGWDSKDWAEAELIECIVRDLYRKLQPKRSRLWSLNDVNSVLVKNKGTEAIQSIVLDLPRGYEEDDGIALTLPQGYEACLHPDAFSKTTQLKLLKLCKMQLPRGLNCLPSALKVLDWIQCPLKSLPLTVELDELVDLKLCHSKLKQLWNGTKFLVCLKFIDMSFSKNLTRVPDISGVPNLESLVLEGCKSLFEVHPSLGLHRKLVLVTFEDCRNLKYLPGKLEMSSMEHLILSGCSKVKQLPEFGGSMLKLSTLSLEGTSIKELPLSVGCLIGLLVLKLKDCKNLCCLPSTIQNLKSLRILNISGCSKLSRLPENLQEIKSLTELNASGTAIEEVTSCILPENLEVLSFKGCKSRSWDWLLDFWSTPQEPEGFRLPHSFSAFSSLRILNLSYCNLSDGSIPGDIEFLSLLLSLDLSGNNFTCLPNSISELSMLTHLHLNCCKRLQSLPELPLGIEVLGACNSTSLETFESNSSKQCSLVPWSKKHYYCRGRSFTLRGSKKVTSEPGSFNLWSKGWIFEENNIYQEDNMLRTRFQMLIPSDKIPSWYDTKNNSSSLATLRLRIPHSWPMTEWVGIAFSCLLVRKVYPSKLYSNFGHGISYKMEDGLKYNVFSWSWGPPSEPSQPHLSIIYMSAKGFRDKIYEDSDCNEIEFRFQTKGDSEGMGIRGDDELEVIGCGGRLVYEQDFEDWNKTIWSMQQ 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01910 857 Pfam TIR domain 22 191 IPR000157 GO:0007165
Bva09g01910 857 ProSiteProfiles TIR domain profile. 20 186 IPR000157 GO:0007165
Bva09g01910 857 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 164 IPR035897 -
Bva09g01910 857 PANTHER - 20 159 - -
Bva09g01910 857 PANTHER - 178 628 - -
Bva09g01910 857 SMART till_3 21 161 IPR000157 GO:0007165
Bva09g01910 857 SUPERFAMILY L domain-like 237 519 - -
Bva09g01910 857 SUPERFAMILY RNI-like 536 632 - -
Bva09g01910 857 Gene3D Ribonuclease Inhibitor 384 518 IPR032675 -
Bva09g01910 857 Gene3D Ribonuclease Inhibitor 521 644 IPR032675 -
Bva09g01910 857 Pfam Leucine Rich Repeat 295 313 IPR011713 -
Bva09g01910 857 Pfam C-JID domain 698 845 IPR045344 -
Bva09g01910 857 Gene3D Ribonuclease Inhibitor 230 383 IPR032675 -
Bva09g01910 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 159 IPR044974 GO:0006952
Bva09g01910 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 178 628 IPR044974 GO:0006952
Bva09g01910 857 Gene3D - 16 192 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01910 Bva-Chr9 14956852 14978435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01910 178 500 WRKY Transcription Factor Family AT4G12020 35.988 2.32e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01910 - - gmx:100815486 530.02