Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01907 ATGCAACTTCCCCGTGGCCTCAATTGTCTTCCTAGTGCACTAAAAGTTCTCGATTGGACAGAGTGTCCTTTAAAGTCTCTGCCCCTTACCATTGAACTTGATGAACTTATTAATCTCAAATTGCACCATAGTAAACTTGAAACACTTTGGAACGGTACAAAGGTAAAGGCACTTCCaGAGTCTTGTTCTAGTGAGCTTAAAGATTGTAAGAACCTTAAATACCTTCCTAGTAAACTTGAAATGAGTTCAACGGAGGATTTGATTCTTTCAGGCTGCTCCAAAGTTAAGCAGCTTCCAGAGTTTGGGGAAAGCATGGAACATCTATCAAGTCTTACTTTGTCGGGAACTTCCACAAAAGAACTACCCTTATCTATTGGATGTTTGATTAGCCTTCATGTTTTAAACTTACAGGATTGCAAGAGTCTTTGTTGCCTTCCAAGTactattcaaaatttaaagtctCTCAGGATTTTCAATATCTCCGGTTGCTCAAGACTTTCTCAATTGccagaaaatttgaaagaaatcaaGAGCTTGATGGAAGTTAATGCAAGTGGAACTGCTATTGCAGAAGTACCATCTTGCATCTTGGATCTAGAAAACCTTCAGGAATTATCCTTTGAAGGTTGCAAAGGGTTAGAGTCGAAGACATGGATTAATTGGCTTCTGGAACTTTGGAGTACTCCTCAAGTTCCCATGGATTTCAGTTTCAGGTTACCTTATTCATTCTCTAGTTTCCTCATGTTGCGAaccttaaatttaagttattgcaATCTCTCAGAAGGATCAATCCCTGGTGATATTGAatgcttatattttttggtGAGCTTAGATCTAAGTGGCAACAATTTTATTAGCCTACCTAACAGCATTTCTGAACTTTCTATGCTGGAGTTTCTTCACATAAATTGCTGTAAGAGGCTTCAATCATTGCCAGAACTTCCATCCCAATTAGAAGTATTAGATGCACGCAATTCTACTTCactgaaaacattaaaatccaATTCTTCAAAGAAATGCAGTCTTGTCCCATGGAGTAAGAATTGGATCTTCCATGAAGACCACAATGATAGAGACAGTTCTTCTACATTgacatttttgaaaagaaaaaagttgtctTCTACCACTGAAACGATTTCCTGGGATAATGCTTGTCTCATAGAAGAAGACATATTCCAGattGTTATACCAAGTGATAAGATTCCATCTTGGTTTAACactcaaaattcttcttctttggcaACACTACGACTACAATTTCCTCATAATTGTCCTCTGACACAATGGGTAGGAATTGCTTTGAGTTGTGTATTAGTATATAAGGGTTACTCAGCTCACCATAGGTCTTATAATGGTTATACAATTTCTTATGATATGGATGGTGTAAAATTCCACCTATCTGCTGCTGGGAGTCTCGGACCTCTTGgGCGTGGTGACAGAGAATGTTTGGAAGTAATAGGGTGCGGTGGTCGTCTGGTATATGAACAAGATTTTGAAGATTGGAACAAAACAATATGGGCGGCAATGCAACAATA 1535 0.3544 MQLPRGLNCLPSALKVLDWTECPLKSLPLTIELDELINLKLHHSKLETLWNGTKVKALPESCSSELKDCKNLKYLPSKLEMSSTEDLILSGCSKVKQLPEFGESMEHLSSLTLSGTSTKELPLSIGCLISLHVLNLQDCKSLCCLPSTIQNLKSLRIFNISGCSRLSQLPENLKEIKSLMEVNASGTAIAEVPSCILDLENLQELSFEGCKGLESKTWINWLLELWSTPQVPMDFSFRLPYSFSSFLMLRTLNLSYCNLSEGSIPGDIECLYFLVSLDLSGNNFISLPNSISELSMLEFLHINCCKRLQSLPELPSQLEVLDARNSTSLKTLKSNSSKKCSLVPWSKNWIFHEDHNDRDSSSTLTFLKRKKLSSTTETISWDNACLIEEDIFQIVIPSDKIPSWFNTQNSSSLATLRLQFPHNCPLTQWVGIALSCVLVYKGYSAHHRSYNGYTISYDMDGVKFHLSAAGSLGPLGRGDRECLEVIGCGGRLVYEQDFEDWNKTIWAAMQQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01907 511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 108 431 IPR044974 GO:0006952
Bva09g01907 511 Pfam Leucine Rich Repeat 36 54 IPR011713 -
Bva09g01907 511 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 108 431 - -
Bva09g01907 511 Pfam C-JID domain 396 498 IPR045344 -
Bva09g01907 511 Gene3D Ribonuclease Inhibitor 1 229 IPR032675 -
Bva09g01907 511 Gene3D Ribonuclease Inhibitor 233 437 IPR032675 -
Bva09g01907 511 SUPERFAMILY L domain-like 68 325 - -
Bva09g01907 511 ProSiteProfiles Leucine-rich repeat profile. 273 294 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01907 Bva-Chr9 14881425 14883471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01907 1 207 WRKY Transcription Factor Family AT4G12020 31.154 1.06e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01907 - - gmx:100815486 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01907 09 14881425 14883471 Bva09g01907 09 14881425 14883471 ECH