Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01903 ATGGCTTTTACCGTcgatgcttcttcttcttcttgtcctTCTGATTCAACCCCACAATGGGACTACCAAATTGTGGAATGTGAGAAAATTTTGGGCCATGAAATTATTCCAATCTTCTATGGGGTGGATCCATCTGATGTGAGAAACCAGAGGAAGTCGTTTGCTGTAGCTTTCAGAAAACATGACGAAAGGTTCGGAGCAGACAAAGAGAAGGTGCGGAGATGGAGAGTTTCCTTAAGGGAAGTTGCCAATATCTCTGGTTGGGACTCCAAGGATTGGGCTGAAGCAGAGCTGATTGAATGCATTGTTAGAGATCTGTACAGGAAACTGCAGCGAAAATGCCTTCTCAAGTTGTGCAAGATGCAACTTCCCTGTGGCCTCAATTGTCTTCCTGGTGCACTAAAAGTTCTTGACTGGATACAACGTCCTTTGAAATCTCTGCCACTTACTGTTGAACTTGATGAACTTGTTCATCTCAAATTTTGTCACAGTAAACTTAAACAACTTTGGAATGGAACAAAGTTTCTAGGATGTTTGAAGTTCATCGACATGAGTTTTTCCAAGAACCTAACCAGAGTGCCAGACATTTCTGGAGTTCCAAATCTAGAAAGCTTGATTTTGGAAGGTTGTAAAAGCTTATTTGAAGTTCATCCATCTCTTGGACAACATAGAAAGCTTGTTCTAGTGACTTTTGAAGATTGTAGAAATCTTAAATATCTTCCAGGTAAACTGGAAATGAGTTCAATGGAGCATTTGATTCTTTCTGGCTGTTCCAAAGTTAAACAGCTTCCAGAGTTTGGGGCAAGCATACTAAAATTATCAAGTCTTTCTTTAGAGGAAACTTCCATAAAAGAACTGCCCTTGTCAATTGGATGTCTGATTGGCCTTGTTGTTTTAAAGTTAAAGGATTGCAAGAATCTTTGTTGCCTTCCAAGTactattcaaaatttgaagtccCTCAGCATTCTCAATATATCTGGATGCTCTAAACTTTCTCGATtgccagaaaatttgcaagaaATCAAGAGTTTGACTAAACTTATTGCAAGTGGAACTGCTATTGAAGAAGTAACTTCGCGCATGCCAAAAAACCTTGAAGTATTATCCTTTTA 1112 0.3696 MAFTVDASSSSCPSDSTPQWDYQIVECEKILGHEIIPIFYGVDPSDVRNQRKSFAVAFRKHDERFGADKEKVRRWRVSLREVANISGWDSKDWAEAELIECIVRDLYRKLQRKCLLKLCKMQLPCGLNCLPGALKVLDWIQRPLKSLPLTVELDELVHLKFCHSKLKQLWNGTKFLGCLKFIDMSFSKNLTRVPDISGVPNLESLILEGCKSLFEVHPSLGQHRKLVLVTFEDCRNLKYLPGKLEMSSMEHLILSGCSKVKQLPEFGASILKLSSLSLEETSIKELPLSIGCLIGLVVLKLKDCKNLCCLPSTIQNLKSLSILNISGCSKLSRLPENLQEIKSLTKLIASGTAIEEVTSRMPKNLEVLSF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01903 370 Gene3D Ribonuclease Inhibitor 113 244 IPR032675 -
Bva09g01903 370 Pfam TIR domain 23 112 IPR000157 GO:0007165
Bva09g01903 370 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 88 IPR035897 -
Bva09g01903 370 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 112 359 IPR044974 GO:0006952
Bva09g01903 370 SUPERFAMILY L domain-like 108 369 - -
Bva09g01903 370 ProSiteProfiles TIR domain profile. 1 110 IPR000157 GO:0007165
Bva09g01903 370 Gene3D Ribonuclease Inhibitor 245 370 IPR032675 -
Bva09g01903 370 Gene3D - 8 112 IPR035897 -
Bva09g01903 370 PANTHER - 112 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01903 Bva-Chr9 14770608 14774374 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01903 121 361 WRKY Transcription Factor Family AT4G12020 36.948 7.13e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01903 - - gmx:100815486 297.745