Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01900 ATGGCAATGACTTGTGGATGCATGATTTGCTTCAAGAAATGGGCAAGAACATTGTTTTTTCTAGAATCTCCTAAAAATCCTGGAAAACGTAGTCGGTTGTGGTCAGTTgatgatattaataatattttggtaaaaaataagGGTACTAAAGCAATTCAAGGCATAGCGTTGGACTTACCTCAAGGATATGAAACGGATGAAAGACGAGCTTTAGACTTACCTCAAGGATATGAAGCATGCTTACACCCTGATGCTTTCTCAAAGGCAAGTCAAGTGAAATTACTAAAGTTGTGTAAGATGCAACTTCCCCATGGCCTCAATTGTCTTCCTAGTGCTCTAAAAGTTCTTGATTGGACAGAGTGTCCTTTAAAGTCTCTGCCACTTACCATTGAACTTGATGAACTTATTAATCTCAAATTGCATCGTAGTAAACTTGAAACACTTTGGAACGGTACAAAGtttcttgGAAGCTTGAAGTCTATCGATATGAGTTTTTCCATGAACTTAACTGGAATTCCAGATATTTCCTGTGTTccaaatctggaaaaattgGTTTTGGAAGGCTGTGAAGGCCTATTGAAAGTTCATCCATCTCTTGGACTCCACGAGAGTCTTGTTCTAGTGAACTTTAAAGATTGTAAGAATCTTAAATACCTTCCTAGTAAACTTGAAATGAGTTCAATGGAGGATTTGATTCTTTCTGGCTGCTTCAAAGATTGCAAGAGTCTTTGTTGCCTTCCAAGTactattcaaaatttaaaatcccTCAGGATTCTCAATATCTCCGGTTGCTCAAAACTTTCTCGATtgccaaaaaatttaaaagaaatcaagagCTTGATGGAAGTTAATGCGAGTAGAACTGCTATTGCAGAAGTACCATCTTGCATCTCGGATCTAGAAAACCTTCAGGAACTATCCTTTGAGGGTTGCAAAGGCTTAGAGTCCAAGACATGGATTAATTGGCTTCTGGAACTTTGGAGTACTCCTCAAGTTCCCATGGATTTCAGTTTCAGGTTGCCTCATTCATTCTCTAGTCTCCCCATGTTgcgaaatttaaatttaacttattgCAATCTCTCAGTAGGATCAATCCCTGGTGATATTGAatgcttatattttttggaGAGCTTAGATCTAAGTGGCAACAATTTTATTAGCCTACCTAACAGGATTTCTGAAGTTTCTATGCTGAAGTTTCTTCACATAAGTTTCTGTAAGAGGCTTCAATCATTGCCAGAACTTCCATCCGAATTAAAAGTATTAGATGCACGCAATTCTACTTCACTGAAAACATTCAAATCCAATTCTTCAAATCAATGCAGTCTTGTCCCATGGAGTAAGAATTGGATCTTCAATGAAAACTACAATGATAGAGACAGTTCGACATTGACTTTTcgata 1403 0.3464 MAMTCGCMICFKKWARTLFFLESPKNPGKRSRLWSVDDINNILVKNKGTKAIQGIALDLPQGYETDERRALDLPQGYEACLHPDAFSKASQVKLLKLCKMQLPHGLNCLPSALKVLDWTECPLKSLPLTIELDELINLKLHRSKLETLWNGTKFLGSLKSIDMSFSMNLTGIPDISCVPNLEKLVLEGCEGLLKVHPSLGLHESLVLVNFKDCKNLKYLPSKLEMSSMEDLILSGCFKDCKSLCCLPSTIQNLKSLRILNISGCSKLSRLPKNLKEIKSLMEVNASRTAIAEVPSCISDLENLQELSFEGCKGLESKTWINWLLELWSTPQVPMDFSFRLPHSFSSLPMLRNLNLTYCNLSVGSIPGDIECLYFLESLDLSGNNFISLPNRISEVSMLKFLHISFCKRLQSLPELPSELKVLDARNSTSLKTFKSNSSNQCSLVPWSKNWIFNENYNDRDSSTLTFR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01900 467 SUPERFAMILY L domain-like 71 414 - -
Bva09g01900 467 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 16 237 - -
Bva09g01900 467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 241 436 IPR044974 GO:0006952
Bva09g01900 467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 237 IPR044974 GO:0006952
Bva09g01900 467 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 241 436 - -
Bva09g01900 467 Gene3D Ribonuclease Inhibitor 327 449 IPR032675 -
Bva09g01900 467 Gene3D Ribonuclease Inhibitor 67 326 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01900 Bva-Chr9 14750428 14752203 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01900 8 308 WRKY Transcription Factor Family AT4G12020 33.799 2.44e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01900 - - gmx:100815486 423.32