Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01885 ATGATTTCTGGACGGTGTGCAGCTTGCAGGAGTCAGAGAAGAAGATGTCCTTCAGATTGCATTTTCTCGCCCTATTTTCCAGCCAATGACCCTCAAAGATTTGCTTATGTTCACAGAATATATGGTGGTAGCAATGTTGGTAAAATGCTCCAgCAAATCCCAAACCATCTACGACCACAAGCTGCAGATACTCTATATTTTGAAGCACAATGCCGGATTCTAGACCCTATTTATGGTTGCGTTGGGATTATCTCTCAGTTGCATCAACAAATCCAAAACGCAGAAAGTGAGCTAGCCAAAATCCAAGTTAAGATCATTTTCCACACGTCCCAAACTCCACAAGTTGAAGCTGAATCAAACTTCAATCCCTTGCCGGATCAAGACAGCGTTGGGCCGTTTCAGTTTGTCCCTTGGAGTCAAACTCTTTGGTTCAATTA 437 0.4279 MISGRCAACRSQRRRCPSDCIFSPYFPANDPQRFAYVHRIYGGSNVGKMLQQIPNHLRPQAADTLYFEAQCRILDPIYGCVGIISQLHQQIQNAESELAKIQVKIIFHTSQTPQVEAESNFNPLPDQDSVGPFQFVPWSQTLWFN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01885 145 Coils Coil 84 104 - -
Bva09g01885 145 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Bva09g01885 145 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Bva09g01885 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
Bva09g01885 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01885 Bva-Chr9 14418501 14419320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01885 1 116 AS2 family AT3G26660 57.759 5.55e-48 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva09g01885 LOB 1.2e-37 No_clan