Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01866 ATGGCGCAGTCACCGGCTGTCAACCCTTTCCCTACCGTCACAATATGTGTTGTTGAGGCGTTGACATCCATGCAGGGTTCTGGGTTTTCTATGGCATCTTCTAACGGCGGCGTGCCTCCAGGGTTTCGGTTTCATCCCACAGATGAAGAGCTCCTTCATTACTACTTGAAGAAGAAGGTGTCCTTTCAGAAATTTGACATGGTGGTGATTAGAGAGGTGGACTTGAACAGGATAGAGCCTTGGGAGTTGCAAGAAAGATGCAAGATTGGATCAACCCCACAAAATGAGTGGTATTTCTTCAGTCATAAGGACAGAAAGTATCCAACAGGATCAAGGACGAACAGAGCCACAAATGCAGGGTTTTGGAAGGCAACAGGGAGAGACAAATGCATTAGGAACAACTACAAGAAGATTGGAATGAGAAAAACCCTTGTGTTCTACAGAGGCAGAGCTCCTCATGGCCAGAAGACCAATTGGATCATGCACGAGTATCGCCTTGAAGATGGCGATGAGATAGATCCCAACGAAGATGGCTGGGTGATTTGCAGAGTtttcaagaagaaagattTATTCAAACTGGGAAATGAAGGTGGCTCCATACATAATTTAGATCAACAACTCACCAACTCCTCAAGTACCACTCAACCTCGCTCTTTCATTCATAGAGAAAACCAATACTTTCTACAAAACCCTAGAAACTCATCTGGATTTGAACCTGATAAACCAGAGCTTGCTTTGCATTATCCCCACTATGAAAATCCTGAATACTCACTCTTCCAAGCTCAACCTCTTCTTCCAACACACAAACCCATTGTTTACGACTACTCATCGTATGCTTCAACCCTACCTTTAGACTCACCCCTCATGGCAAAGCAGCTCATGTCAAACCCTAGAGACTGTGAAAGCGGCAGCAAAGGCTTGAGGTACCAAGTTTCAGAGCCCGGCATGGAAGTTGGCACGTGTGAAGAGGCACAAGAAATGggaaatggaagagaagaaggaaTGAATCAATGGGGTGTGCTTGATAGgcttgtttcttttcatcttgGAAATGGAGATTCTTCAAAAGGGGTTAGGTATGAAGATGCAAATGCAGAATCTGTGCACCAAATCAATCAGCTCTCGTTGCGTGGAGAAATGGACTTTTGGGCCTATGGAAAGCGGTG 1166 0.4322 MAQSPAVNPFPTVTICVVEALTSMQGSGFSMASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMVVIREVDLNRIEPWELQERCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNNYKKIGMRKTLVFYRGRAPHGQKTNWIMHEYRLEDGDEIDPNEDGWVICRVFKKKDLFKLGNEGGSIHNLDQQLTNSSSTTQPRSFIHRENQYFLQNPRNSSGFEPDKPELALHYPHYENPEYSLFQAQPLLPTHKPIVYDYSSYASTLPLDSPLMAKQLMSNPRDCESGSKGLRYQVSEPGMEVGTCEEAQEMGNGREEGMNQWGVLDRLVSFHLGNGDSSKGVRYEDANAESVHQINQLSLRGEMDFWAYGKR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01866 388 Gene3D NAC domain 47 191 IPR036093 GO:0003677|GO:0006355
Bva09g01866 388 ProSiteProfiles NAC domain profile. 38 187 IPR003441 GO:0003677|GO:0006355
Bva09g01866 388 SUPERFAMILY NAC domain 32 187 IPR036093 GO:0003677|GO:0006355
Bva09g01866 388 Pfam No apical meristem (NAM) protein 39 166 IPR003441 GO:0003677|GO:0006355
Bva09g01866 388 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 34 272 - -
Bva09g01866 388 PANTHER PROTEIN BEARSKIN2-LIKE 34 272 IPR033519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01866 Bva-Chr9 13490992 13494349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01866 31 382 NAC Transcription Factor Family AT1G33280 54.469 1.03e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g01866 NAM 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01866 - - gmx:100804181 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01866 09 13490992 13494349 Bva09g01866 09 13490992 13494349 ECH