Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01854 ATGGTAAAGCGCTTGATTCCGAGCTTGAACCGCATCCTAATTGAGAAAATCGTGCCTCCGTCGAAGACCAATGTCAGCATTCTCCTCCTTGAGAAGTCCTCTAAGTTGTTATCATCTGGGTTGGTCTCAAAACAACTTAACTCTAGGAAGGTGGTAGCGATAGGACCTGGAACTTGGGACAAAGCTGGAAACTTAATTTTAGTGGCTGTGAAAAAGGGCGACACCGTCCTGTTGTCAGAATATGGTGGTACCGAAGTCAAGCTTGGTGATATGGAGTATGCTCTATG 287 0.4564 MVKRLIPSLNRILIEKIVPPSKTNVSILLLEKSSKLLSSGLVSKQLNSRKVVAIGPGTWDKAGNLILVAVKKGDTVLLSEYGGTEVKLGDMEYAL 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01854 95 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva09g01854 95 Gene3D GroES chaperonin 1 95 IPR037124 GO:0006457
Bva09g01854 95 PRINTS 10kDa chaperonin signature 71 83 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva09g01854 95 PRINTS 10kDa chaperonin signature 36 57 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva09g01854 95 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva09g01854 95 SUPERFAMILY GroES-like 3 94 IPR011032 -
Bva09g01854 95 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva09g01854 95 PANTHER GROES-LIKE FAMILY PROTEIN 1 95 - -
Bva09g01854 95 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva09g01854 95 Pfam Chaperonin 10 Kd subunit 6 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01854 Bva-Chr9 13248575 13248953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01854 2 90 Calmodulin-binding Proteins AT5G20720 32.584 2.09e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01854 K04078 - vvi:100265504 112.849