Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01845 ATGGTAGTGATTATTCTTTGCCACTTAATACACTTGGAAGTTTGCCAGATTTATGAGATTCAGAGAGCTCAAAGAGAAGCAGATATTCGACATCAACCGTCTGATCAGAGTGATCAGACTTTGAATATTCAGATAGACGGCAGAGTTCAACTTCAACCTCTAAGGGCTGAGAGGAGAGAGCATAGTGAAAGGTCACCGCAGTTCATGAATACTGCACTTGCTGCTAGGGTTATTGCCTCTTTGCTTGTCTTGCCGCCGACAAAATGCTTTGAAAGCACAGAAAGCAGCAGTGGTCAAACGGCAGGATCCAAGGATGAGTGTGCAATTTGCTTGGAAGATTTCAAGAATGGTGAGTCGGTCCAAGCTTTCCCCAAGTGTAACCATGTATTTCATCCGACTTGTATTAACACTTGGTTGCTAGTGGGAAAATTTACTTGCCCTTATTGTCGTTTCACTCTGCAGGAGTTAGGTGTTTG 476 0.4349 MVVIILCHLIHLEVCQIYEIQRAQREADIRHQPSDQSDQTLNIQIDGRVQLQPLRAERREHSERSPQFMNTALAARVIASLLVLPPTKCFESTESSSGQTAGSKDECAICLEDFKNGESVQAFPKCNHVFHPTCINTWLLVGKFTCPYCRFTLQELGV 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01845 158 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 152 IPR044675 -
Bva09g01845 158 ProSiteProfiles Zinc finger RING-type profile. 107 150 IPR001841 -
Bva09g01845 158 SMART ring_2 107 149 IPR001841 -
Bva09g01845 158 Pfam Ring finger domain 105 150 IPR001841 -
Bva09g01845 158 SUPERFAMILY RING/U-box 106 155 - -
Bva09g01845 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 155 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01845 Bva-Chr9 13075485 13075961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01845 70 153 C3H Transcription Factor Family AT2G17450 43.023 3.99e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01845 - K10664 aprc:113865236 85.5001