Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01844 ATGGATTTAGATTGCGAGTACTATTTCGTCGATGGAATCTTTATCACTATTAAGTGTTCACTAGTTTtgtccataatttttttcgcAATTTCTCTTCGGGAACTACATTATgcctcaattatttttattggcttAGTGGTAGTGCTTATTCTGTGCCACTTTATACACTCAAAAGTTTGCCAGATTTATGAGATTCAGAGAGCTCAAAGAGATGCAGAGATTCAACCTCGACCGTCTGATCAGAACTTGAGTATTCAGATAGACGATAGAGTTCAACTTCAGCCTCTAAGGGCTGAGAGGAGAGAGCATAGTGAAAGGTCACCGCAGTTCATGAATACTGCACTGCCTGCTAGGGTTATTGCCTCTTTGCTTGTCTTGCCGCCGACAAAAAGCTTTGAAAGCACAGAAAGCAGCAGTGGTCAAACGAAAGGATCCAAGGATGAGTGTGCAATTTGCTTGGAAGATTTCAAGAATGGTGAGTCGGTCCAACCCTTCCCCAAGTGTAACCATGTATTTCATCCGACTTGTATTAACACTTGGTTGCTAGCGGGAAAATTTTCTTGCCCTTATTGTCGTGTTAATCTGCAGGAGTTAGGTGTTTG 602 0.3937 MDLDCEYYFVDGIFITIKCSLVLSIIFFAISLRELHYASIIFIGLVVVLILCHFIHSKVCQIYEIQRAQRDAEIQPRPSDQNLSIQIDDRVQLQPLRAERREHSERSPQFMNTALPARVIASLLVLPPTKSFESTESSSGQTKGSKDECAICLEDFKNGESVQPFPKCNHVFHPTCINTWLLAGKFSCPYCRVNLQELGV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01844 200 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 35 194 IPR044675 -
Bva09g01844 200 SMART ring_2 149 191 IPR001841 -
Bva09g01844 200 SUPERFAMILY RING/U-box 148 197 - -
Bva09g01844 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 198 IPR013083 -
Bva09g01844 200 ProSiteProfiles Zinc finger RING-type profile. 149 192 IPR001841 -
Bva09g01844 200 Pfam Ring finger domain 147 192 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01844 Bva-Chr9 13066622 13067224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01844 112 192 C3H Transcription Factor Family AT2G17450 42.169 3.25e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01844 - K10664 aprc:113865236 95.1301