Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01843 ATGGATTTCAATCATCATGATTATTCATCTTGGCTTCAACCCCTTTCTCCTTCCATGGCCTCTGCCATCGATACTATTGGTAGGTTTTCTGTAATCACGACGCGGACAATGGCAATGCTATTAATGACGGTGGTTATAGTAAATTTTCTGGGACCCAATTCTTTAAGAAGAACTATTATTTTTGCCATATTCATAACTGGATGCTGTTGTGGGGTTTTAGCAATTTTATCTCAGTGTTTTAAAGCAATATGGGGGGTTCAATTTCAACTTGAAAGAAGAAGGATTGCTATGCCACCACAGAAAATCTTCAAGAGTGAAACGACTGGATTCAAAGATCAGTGTGTCTTTTGCTTGGAAGAATTCAAGAATGGGGAGTTAGTTCAACCATTTCCCATATGCAACCATGAGTTCCATGCATCTTGCATTAATACTTGGTTGAATGGTGGAAAAACTACTTGTCCTATCTGTCGTTTTTCTCTGCAGGAAATTGTGATTGTTGaaagaacaattttata 515 0.3728 MDFNHHDYSSWLQPLSPSMASAIDTIGRFSVITTRTMAMLLMTVVIVNFLGPNSLRRTIIFAIFITGCCCGVLAILSQCFKAIWGVQFQLERRRIAMPPQKIFKSETTGFKDQCVFCLEEFKNGELVQPFPICNHEFHASCINTWLNGGKTTCPICRFSLQEIVIVERTIL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01843 171 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 87 162 - -
Bva09g01843 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 165 IPR013083 -
Bva09g01843 171 SUPERFAMILY RING/U-box 107 163 - -
Bva09g01843 171 ProSiteProfiles Zinc finger RING-type profile. 114 157 IPR001841 -
Bva09g01843 171 Pfam Ring finger domain 112 157 IPR001841 -
Bva09g01843 171 SMART ring_2 114 156 IPR001841 -
Bva09g01843 171 PANTHER OS06G0666500 PROTEIN 87 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01843 Bva-Chr9 13064371 13064886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01843 90 160 C3H Transcription Factor Family AT3G10910 38.889 2.36e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01843 - K15692 aprc:113865236 91.2781