Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01842 ATGTGCAATATTCGAATTGCAGAACGAAGGGCTCAACTTCAACTTCAAAGGGAAGAAAGGAGTGGGGAAATCCAAAGTGAGTCAGATCTTCCAACCACAGAGATATCTAAGGCTGCAAAGTTGCTGATCTTGCCACCGGTTAGAAGCTTCCAACGCAGCCACAGCAGCAACGAAAAGACAACAGGATCCAAAGAGTGTGTCATTTGCTTCGAAGAACTCAAGAATGGAGATTTGATTCAACATTTGCCAAAGTGTAACCACGAGTTTCATGCCTCCTGCATCAATTCTTGGTTGCAAATTGGAAAATTTACTTGTCCTGTTTGTCGTTTTGTTCTGCGGGATCTACTAGTTATTGAATTGATGAATTGTGAGTA 374 0.4198 MCNIRIAERRAQLQLQREERSGEIQSESDLPTTEISKAAKLLILPPVRSFQRSHSSNEKTTGSKECVICFEELKNGDLIQHLPKCNHEFHASCINSWLQIGKFTCPVCRFVLRDLLVIELMNCE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01842 124 PANTHER OS06G0666500 PROTEIN 2 114 - -
Bva09g01842 124 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 2 114 - -
Bva09g01842 124 SMART ring_2 66 108 IPR001841 -
Bva09g01842 124 SUPERFAMILY RING/U-box 55 113 - -
Bva09g01842 124 Pfam Ring finger domain 64 109 IPR001841 -
Bva09g01842 124 ProSiteProfiles Zinc finger RING-type profile. 66 109 IPR001841 -
Bva09g01842 124 CDD RING-H2 66 109 - -
Bva09g01842 124 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 115 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01842 Bva-Chr9 13055535 13055909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01842 35 109 Rapid Response to Elicitors AT3G05200 39.241 2.52e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01842 - K10664 adu:107470824 82.0333