Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01826 ATGCTGCTGCAAGCTACGGCAGGTTTTTCATCCAAAAATCTCATTGGATCTGGTAGTTTTGGTTCTGTATATAAAGGGACTCTGGATCAGGAGGAAAGACTTGTAGCTGTGAAGGTCCTCAATCTACAGAAGAAGGGAGCTTCAAAGAGCTTCTTGGCAGAATGCAATGCCTTGAAAAGAATTAGGCATCGAAAACTTGTCAAGTTATTGACATGCTGCTCTGGCACTAATTACAAGGGCAATGGTTTCAAAGCtctttgtttttg 266 0.406 MLLQATAGFSSKNLIGSGSFGSVYKGTLDQEERLVAVKVLNLQKKGASKSFLAECNALKRIRHRKLVKLLTCCSGTNYKGNGFKALCF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01826 88 ProSiteProfiles Protein kinase domain profile. 9 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01826 88 SUPERFAMILY Protein kinase-like (PK-like) 4 78 IPR011009 -
Bva09g01826 88 Pfam Protein kinase domain 10 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01826 88 PANTHER OS04G0122200 PROTEIN 2 88 - -
Bva09g01826 88 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva09g01826 88 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Bva09g01826 88 PANTHER PUTATIVE-RELATED 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01826 Bva-Chr9 12783744 12784010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01826 2 88 Receptor kinase-like Gene Family AT3G47580 59.770 5.44e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva09g01826 Pkinase 3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01826 - - qsu:112036861 140.584