Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01814 ATGGTACACTCAGACTTCTACGCTACCCATAGTTACTATAACACTAGGCTTGTTCTCAATGTCACAGATTTCAAAACTGtagatttgattaaaaatgcAGCAGTGCAAGCCATTATAGGGCCACAACACTCGAGGGAAGCCAACTTGATTATACAAGTGTGTAACAAAGCAAGGGTGCCAGTTCTTTCGTTCTCCGCAACAAGTCCTTCTCTGACTTCCCCTCGGAATCCTTATTTTAACCGAATAGCCCATAATGAGTGTGCTCAAGCTCAAGCCATTTCAGCACTTGTCCAAGCTTTGGAATGGAAAGAAGTGATTCTCATATACATACAAGACATATATGCAGAGGAAGCGATACCCTGCATAACTAGAGCATTGCAAGAGGCTAATATCCATGTTTCCTATCATGCTGTAATTCCCCATTCACCAGATGATAACCATGTTGTCCAAGAGcttcaaaaattaacaactttGACAACCAGGGTCTTCATTGTGCATATGTCTCCCATGCTTGGGTCCCGTCTATTCGCCTTTGCAAGAGAGATCGGGATGATGAGTGAAGGCTACGTTTGGATCCTCACCGCTGAAATGACTAACCAATTAGCCTCGTTGAATTCATCCATCAGTGTTACGATGCAGGGTGTTTTAGGCGCAAGTTCTTATTTTCCTAAGGCAAAGGAGTTTCAAGATTTTGAGATTCGatcgaaaataaaatttgaacaagAAAATCCTAAAACTATAGGACgtgaattgaatattttttgtctatgGGCTTATGATGCTGTAACAGCACTAGCTATGGCAGTTGAGAAGGGCCGGGTCAAAGAATTTGGCTTTCAAAAGGCAAGTACTAATTCCAGCAATACAACAGATTTTGAAACTCTTGGGATTTCATTGAGTGGTCCAAAACTTGGAGAATCACCGTCAAAAACCAGATTTGAAGGCCTTTCAGGAGATTTCAGTTTGGTTGACGGAGAAGTTAACTCATCAATTTTTCAGATAATTAATGTGATTGGTGATGGGAAAAAAGAAGTGGTATTTTGGACACCAGAAAATGGACTGAGAAGAAACCTGGattcaacaaagagagacaCAAACACAAGCACATATTCAACTTCCAAGACCAATTTAGCACTAATTATATGGCCAGGGGACTCTTCCTCTGTTCCTGAAGGACTGGATTTACTAGCAAATGAAAAGATACTACGAATAGGATGTTCCAATGTTTTTAAGGTTGTAATGGATGCATTATCGTACCATGTTCCCTATGAATTCTTCCCTTTTAACCCTGGACATTATGACAACTTCAGCACAGGTTCCTTCTACGATGATTTGATACTGGAAGTCTATCATGGAAAATTTGATGCTGCAGTGGGAGATATAACAACTAGAGCTCAGAGATCACAGTACGTGGACTTCACGTTACCTTTCACAACAAATGAAGCAACTTTTATAGTGCCAACCAAGCAGATCAAGAACAAGAATGAAGCTTGGATTTTCTTGAAACCCTTGACATGGGAATTATGGGTCACAAGCTTTTGCTTCTTTGCATTCATTGGTTTAATCGTTTGGGTGCTGGAACACGGACTCAATAAAGAAACTAGGATTTCTCCCTCACATCATGTGGATACCGGCTTTTGGTTTTCCATCTCAACCTTGGTTTTTTTACGATGGGAGAGAATCCATGGCAACTTGGCAAGGTTTGTGGTGATGATATGGGTTTTTGTGGTGCTAATATTGACTCAGAGTTATACAGCTAGCTTCAACACACTTTTGACAGTCGAACAAATCCAACCAGCTGTGACTGATATAAACCAGCTCATACAAAGCGAGGACGTTGTTGGATACCAGTATAGTTCCTATTCTATTCAATTCTTAAAGCAAATGGGTTTCGATGAAACCAAGCTTCGAGCTTATTA 1919 0.3893 MVHSDFYATHSYYNTRLVLNVTDFKTVDLIKNAAVQAIIGPQHSREANLIIQVCNKARVPVLSFSATSPSLTSPRNPYFNRIAHNECAQAQAISALVQALEWKEVILIYIQDIYAEEAIPCITRALQEANIHVSYHAVIPHSPDDNHVVQELQKLTTLTTRVFIVHMSPMLGSRLFAFAREIGMMSEGYVWILTAEMTNQLASLNSSISVTMQGVLGASSYFPKAKEFQDFEIRSKIKFEQENPKTIGRELNIFCLWAYDAVTALAMAVEKGRVKEFGFQKASTNSSNTTDFETLGISLSGPKLGESPSKTRFEGLSGDFSLVDGEVNSSIFQIINVIGDGKKEVVFWTPENGLRRNLDSTKRDTNTSTYSTSKTNLALIIWPGDSSSVPEGLDLLANEKILRIGCSNVFKVVMDALSYHVPYEFFPFNPGHYDNFSTGSFYDDLILEVYHGKFDAAVGDITTRAQRSQYVDFTLPFTTNEATFIVPTKQIKNKNEAWIFLKPLTWELWVTSFCFFAFIGLIVWVLEHGLNKETRISPSHHVDTGFWFSISTLVFLRWERIHGNLARFVVMIWVFVVLILTQSYTASFNTLLTVEQIQPAVTDINQLIQSEDVVGYQYSSYSIQFLKQMGFDETKLRAY 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01814 639 Gene3D - 87 243 - -
Bva09g01814 639 Pfam Receptor family ligand binding region 26 339 IPR001828 -
Bva09g01814 639 SUPERFAMILY Periplasmic binding protein-like II 377 636 - -
Bva09g01814 639 PANTHER GLUTAMATE RECEPTOR 2.9 3 639 - -
Bva09g01814 639 Gene3D - 401 496 - -
Bva09g01814 639 CDD PBP1_GABAb_receptor_plant 1 358 IPR044440 -
Bva09g01814 639 SUPERFAMILY Periplasmic binding protein-like I 25 384 IPR028082 -
Bva09g01814 639 Pfam Bacterial extracellular solute-binding proteins, family 3 442 629 IPR001638 -
Bva09g01814 639 Gene3D - 497 633 - -
Bva09g01814 639 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 639 - -
Bva09g01814 639 Gene3D - 286 400 - -
Bva09g01814 639 Pfam Ligand-gated ion channel 505 610 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01814 Bva-Chr9 12557846 12560484 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01814 4 639 Ion Channels AT2G29120 40.713 2.30e-178 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01814 K05387 - qsu:112022976 652.899