Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01812 ATGAAACGCATTGCTTGTGTTTCCATCTTCTACATTTCAATATGTTCTATCTGCTTAGCCATAAGACAAAGCACGACAGAACCAGTTAAAACAGTTAATGTTGGTGTGATTCTCGGTACAACTGACGAATGGATTGGCAAGTTGTGTTTGACTTGCATCCAAATGGCGCACTCGGACTTCTACGCTGCCCACAGTTACTATAACACTAGGCTTGTTCTCACTGTCAGAGATTCTAAAAGTGATTTGATTGCAGCTACTTCAGCAGCTGTAGGTTTGATAAAAAACGCAGCAGTGCAAGCGATTATAGGGCCACAAGACACAAGGGAAGCCAACCTGATAATAGAAGTGTGTAACAAAGCTGGGGTGCCAATCCTATCATTCTCAGCAACAAGTCCTTCTCTAACATCCCCTCGAAGCCCATACTTCTACCGAGTAGCCCAGAATGGGTGTGCTCAAGCACATGCCATTTCAGCACTTGTCCAAGCTTTCGAATGGAAAGAAGTGGTGCCCATATACATACGAGACATATATTCTGAGGAAGTAATATCTTGCATAACAAGAGCCTTGCAAGAGGCTAATGTCTGCGTTTCCTATCAAGTTGCAATTCCGCAATCACCAGATGACAACCATATTGTCCAAGAGCTTCAGAAATTAACAACTTTGACAACCAGAGTCTTCATTGTGCACATGTCTCCTATACTTGGTTCCCGTCTCTTTGCCATTGCGAAAGAGATTGGAATGATGAGTGAAGGCTATGTTTGGATCATCACCACTGAAATGACTAACCAATTAGCATCCTTAAACTCTTCAATCACTGATACTATGCAAGGTGTTTTAGGTTTAGGTGCCTATTTTCCTAAAACAAAGGAGTTTCAAGATTTTCATGTTAgatggaaattaaaatttcaacaagaaaatCCCTCCATTATAGGACCTGAATTGAATGTTTACTGTCTATGGGCTTATGATGCTGTAACAGCACTAGCCATGGCTGTTGAGAAGGGCGGGATCGAAGAATTTGGCTTTCACAAGACAAGTACAGATTCTAGTGATACAACAGATTTTGAAACTCTAGGGGTTTCTTTAAGTGGTCCAAAACTCGCAGAATCACTGTCTGAAACCAGATTTCAAGGCCTTTCAGGGGATTTCAGTTTGCTTGACGGAGAAGTGAACTCATCAATTTTTCAGATAGTAAATGTGTTTGTCGATGGCAAAAATGTAGTGGGATTTTGGACACCAGAAAATGGGCTAGCAAGAAAACTCAGTTCAACAGAGAAGGACACAAACACAGGCATATATTCAACCTCCAGGACTAATTTAGGACCAATTATATGGCCAGGGTATTCTTTTTCTGCTCCTGGAGGCTGGGATTTACTAGCAAACGGAAAGAAACTGAGAGTAGTAGTTCCATTTAATTCCCTATTCAGGGGATTCGTTAATGTGGATTATGATCCTAGTACCAACAGAATAGAAGCCAGTGGCTACTGTATAGATGTTTTTAAGGCTGTAATGGAGGCAATGCCGTATCATGTTCCTTATGAATTCATCTCGGTACCTCGAGATCATGGCAACTTGACCCCTGGCTACTATGGTCATTTGATAAACGAAGTCTATCTTGGAAAATTTGATGCTGCGGTGGGAGATATAACTATTAGAGCTAAGAGGTCCTTGTACGTAGACTTCACGTTACCTTTCACAGAAAATCAAGCAACATTTATTGTGCCAACCAAGCTGATccggaacaagaaagagactTGGATTTTCTTGAAACCCTTGACATGGGAATTATGGGTCACAAGTTTTTGCTTCTTTGTGTTCATTGGTTTTGTGGTTTGGGTGTTGGAACAAGGATTCAATACAGAACATAGGGGCCATCCCGAACATCAAAAGGATAAAAGcctttggttttctttgtCAACCTTGGTATTTTCACAATGGGAAAGGATCCATAGCAACTTGGCAAGATTTGTGGTGATCATATGGATTTTTTTGGGATTGATATTGATCCAGAGTTATACAGCTAGTTTGACGACACTTTTGACAGTTGAACAACTCCGACCAGCCGTGACAGATGTATATCAGCTGAAACAGAGTGGGGATTATGTTGGATACCATAATTCCTATCTTGTTGAATTCTTAAGAAAAATGGGTTTTGATGAAACCAAGCTTCGAGCTTATAAGACTCCAGAAGAATGTGATAAACTTCTAACAATGGGAAGCAGAAATGGAGGTATAGCTGCCGCCTTTGATGAAACCCCATATATAAAAGTTCTGCAGTCAAGGTATTGCTCCAAATATACAATTATTGGACCTACTTTTCAGACTCAAGGATTTGCTTTTGCTTTTAGAAGAAACTCGCCGTTTGTACCTGATGTTTCAAGGGCTATCTTAAATTTGACACACAGAAATAAAGATGTCATGAAAGAAATTGCAGATAAATGGTTTATGAATGAATCCCTCTGTCGACAACACTCTACTGTTGATGCTTCCTATAGTCTGGATCTTGACAGCTTCCGTGGACTGTTCTTGCTGTCTGGGATTGCCTTATCATCAGCACTCATCATCCATGCAGCTATGTTCTTATACAGACAAAGGCAGAAGTTTATCGAGTTCCATCCAAACAAGTTGCTGTGGAAAAGAATTTGTATCATGTTAAGAACCATTAATCAGAAAGTCGTTAGGATTCATACTGGAGAACAAATACCCAGAGCTACAACTACCACTGCTAGTAATCCTCATGATATACATGTGACTGATGCTTCTTG 2765 0.396 MKRIACVSIFYISICSICLAIRQSTTEPVKTVNVGVILGTTDEWIGKLCLTCIQMAHSDFYAAHSYYNTRLVLTVRDSKSDLIAATSAAVGLIKNAAVQAIIGPQDTREANLIIEVCNKAGVPILSFSATSPSLTSPRSPYFYRVAQNGCAQAHAISALVQAFEWKEVVPIYIRDIYSEEVISCITRALQEANVCVSYQVAIPQSPDDNHIVQELQKLTTLTTRVFIVHMSPILGSRLFAIAKEIGMMSEGYVWIITTEMTNQLASLNSSITDTMQGVLGLGAYFPKTKEFQDFHVRWKLKFQQENPSIIGPELNVYCLWAYDAVTALAMAVEKGGIEEFGFHKTSTDSSDTTDFETLGVSLSGPKLAESLSETRFQGLSGDFSLLDGEVNSSIFQIVNVFVDGKNVVGFWTPENGLARKLSSTEKDTNTGIYSTSRTNLGPIIWPGYSFSAPGGWDLLANGKKLRVVVPFNSLFRGFVNVDYDPSTNRIEASGYCIDVFKAVMEAMPYHVPYEFISVPRDHGNLTPGYYGHLINEVYLGKFDAAVGDITIRAKRSLYVDFTLPFTENQATFIVPTKLIRNKKETWIFLKPLTWELWVTSFCFFVFIGFVVWVLEQGFNTEHRGHPEHQKDKSLWFSLSTLVFSQWERIHSNLARFVVIIWIFLGLILIQSYTASLTTLLTVEQLRPAVTDVYQLKQSGDYVGYHNSYLVEFLRKMGFDETKLRAYKTPEECDKLLTMGSRNGGIAAAFDETPYIKVLQSRYCSKYTIIGPTFQTQGFAFAFRRNSPFVPDVSRAILNLTHRNKDVMKEIADKWFMNESLCRQHSTVDASYSLDLDSFRGLFLLSGIALSSALIIHAAMFLYRQRQKFIEFHPNKLLWKRICIMLRTINQKVVRIHTGEQIPRATTTTASNPHDIHVTDAS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01812 921 Gene3D - 155 310 - -
Bva09g01812 921 PANTHER GLUTAMATE RECEPTOR 2.9 32 894 - -
Bva09g01812 921 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 894 - -
Bva09g01812 921 Gene3D - 62 154 - -
Bva09g01812 921 CDD PBP1_GABAb_receptor_plant 33 421 IPR044440 -
Bva09g01812 921 Pfam Ligand-gated ion channel 817 848 IPR001320 GO:0015276|GO:0016020
Bva09g01812 921 PIRSF IGluLR_plant 1 918 IPR017103 -
Bva09g01812 921 CDD GluR_Plant 463 815 - -
Bva09g01812 921 Pfam Receptor family ligand binding region 49 400 IPR001828 -
Bva09g01812 921 SUPERFAMILY Periplasmic binding protein-like I 31 447 IPR028082 -
Bva09g01812 921 SUPERFAMILY Periplasmic binding protein-like II 442 817 - -
Bva09g01812 921 Gene3D - 355 463 - -
Bva09g01812 921 SMART GluR_14 464 817 IPR001320 GO:0015276|GO:0016020
Bva09g01812 921 Gene3D - 464 584 - -
Bva09g01812 921 Pfam Bacterial extracellular solute-binding proteins, family 3 491 816 IPR001638 -
Bva09g01812 921 Gene3D - 585 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01812 Bva-Chr9 12535249 12541649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01812 29 897 Ion Channels AT2G29110 45.475 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01812 K05387 - qsu:112022976 918.687