Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01805 ATGAAACCCATTGCTTGTGTTTCcatcttctttgtttcaataTGTTTTATCTGCTTAGCCATGGTGAGCACGACAGAACcagttaaattagttaatgttGGCGTGATTCTGGATATAGCTGACGAATGGATTGGCAAGTTGTGTTTGAGCTGCATCCAAATGGCACACTCGGACTTCTATGCTACCCACAGATACTATAGCACAAGGCTTGTTCTCAATCTCAGAGATTCTAAAAGTGACCTAATTGCAGCTGCTTCAGCAGCTGtagatttgataaaaaatgtaGCAGTGCAAGCCATTATAGGGCCACAAGACTCAAGGGAAGCCAACCTGATTATAGAAATGTGTAACAAAGCTAGGGTGCCAATCCTATCGTTCTCAGCAACAAATCCTTCTCTAACTTCTCCTCGGAATCCTTATTTTTACCGAATAGCCCAGAATGAGTGTGCTCAAGCACATGCCATTTCAGCACTTGTCCAAGCTTTTGAATGGAAAGAAGTGGTGCCCATATTCATAGAAGACATGTATTCTGAGGAAGCAATATCCTGCATAACTAGATCCTTGCAAGAAGCTGATGTCCGAGTTTCCTATCAAGCTGCAATTCCCCAATCAGCAGTCGACTACCAAATTGTCCAAGagcttcaaaaattaaataatttgacaaCCAGAGTCTTCGTTGTGCACATGTCTCCCATACTTGGTTCTCGTCTCTTTGCCATTGCAAGAGAGATTGGAATGATGAGAACAGGCTATGTTTGGATCGTCACCACTGAAATGACCATCCAATTAGCATCCTTAAGCTCTTCAATCACTGATACGATACAGGGTGTTGTAGGGGTAGGTGCCTATTTTCCTAAATCAAAGGAGTTTCAAGATTTTCAGGTTcgattgaaattaaaatctcaACAAGAAAATCCCACCATTATAGGATCTGAATTGAATGTTTACTGTCTATGGGCTTATGATTCTGTAACAGCACTAGCCATGGCAGTTGAGAAGGCCGGGATCAAAGAATTTGGCTTTCAGAATACAAGTACAGATTCCCGCAATACAACAGATTTTGAAATGCTTGGAGTTTCTTTGAGCGGTCCACAACTTGGAGACTCGCTGGTAGAAACCATATTGCGAGGCCTTTCAGGGGATTTTAGTCTAGTTGACAGAGAAATCAACTCACCAATTTTTCAGATAATTAACGTTTTTGGTGATGGAAAAAGAGTAGTGGGATTTTGGACTCCAAAAATTGGACTGGCAAGAAAACTCGATTCCACAAGGACAAACACAGGCACAGGCACATATTCAACTTCCAAGTCCAATTTAGGCCCAATCATATGGCCAGGGGACTCTTCCTCTGCTCCTGAAGGCTGGGATTTACTGGCAAACGGAAAGAAACTCAGAATAGGAATTCCATATAAAACTGGATCATTCAGTGAATTTGTTAAAGTGGAATATGTTGACGGTAATGACGGAATTGCCAGTGGCTACTGTATAGATGTTTTCAAGGTTGTATTACAAGCATTACCGTACCCAGTTTCTTATGAATTCTTCCCTTTTCGCCATCGGGATTATGGTAATCTCACCAGTTCCtactataataatttgatacaGCAAGTCTACCTTGGAACAATTGATGCTGCCGTGGGAGATATAACAATTACAGCTCAGAGGTCACTGCATGTGGACTTCACGTTACCTTTCACAGGAAATGAAGCAACTTTTATTGTGCCAACCAAGcaagagaacaagaaagatcCATGGATCTTCATTAAACCCTTGACATGGGAATTATGGGTCACAAGTTTTTGCTTCTTTGTGTTCATTGGTTTTGTGGTTTGGGTGTTGGAACACGGGGTCAATAAAGAATCGAGGGTTCCTCCATCACATCAAGTGGATACAAGtctttggttttctttatCAACGTTGGTATTTTCACAATGGGAAAGAATCCATAGCAAGTTGGCAAGGTTTGTGGTGATCATATGGGTTTTTATGGGACTGATATTGACGCAGAGTTACACAGCTAGCTTGACAACACTTCTGACTGTCGAACAGCTAAGACCGACCGTGACTAATATAAATCAGCTGATACAGAATGGGGAATCTGTTGGATTCCAATATGGTTCCTTTTCTCTTGAATTCTTAAGACGAATGGGTTTTGATGATAGTAAGCTTCGAGCTTATAAGACTGCAGAAGAATGTGATCGACTTCTAACAATGGGAAGCAGAAATGGAGGTATCGCTGCCGCCTTTGATGAAATCTCATATTTACAAGTTCTGCTGTCTAGGTATTGCTCCAAATATACAACCATTGGACCTACTATTCAGACTCAAGGATTTGCTTTTGCATTTCGAAGAACTTCGCCATTTGTACCAGATTTTCCAAGGGCTATCTTAAATTTGACAGAGAGAAACAAAGACATCATGAAAGCAATTGCAGATAAATGGTTTATGAATGGATCCCTTTGTCCGCAACCCTCTAGTGTGGATGCTTCCTACAGTCTGGATCTTGACAGCTTCCGAGGACTATTCGTATTGTCAGCGATTGCCTCATCATCAGCACTCATCATATACGCAGCTGCATTCCTATGCAGACGTGGGCGGGAGTTTATGCAGTTCTATTCCAACGATTCACTATGGTA 2636 0.398 MKPIACVSIFFVSICFICLAMVSTTEPVKLVNVGVILDIADEWIGKLCLSCIQMAHSDFYATHRYYSTRLVLNLRDSKSDLIAAASAAVDLIKNVAVQAIIGPQDSREANLIIEMCNKARVPILSFSATNPSLTSPRNPYFYRIAQNECAQAHAISALVQAFEWKEVVPIFIEDMYSEEAISCITRSLQEADVRVSYQAAIPQSAVDYQIVQELQKLNNLTTRVFVVHMSPILGSRLFAIAREIGMMRTGYVWIVTTEMTIQLASLSSSITDTIQGVVGVGAYFPKSKEFQDFQVRLKLKSQQENPTIIGSELNVYCLWAYDSVTALAMAVEKAGIKEFGFQNTSTDSRNTTDFEMLGVSLSGPQLGDSLVETILRGLSGDFSLVDREINSPIFQIINVFGDGKRVVGFWTPKIGLARKLDSTRTNTGTGTYSTSKSNLGPIIWPGDSSSAPEGWDLLANGKKLRIGIPYKTGSFSEFVKVEYVDGNDGIASGYCIDVFKVVLQALPYPVSYEFFPFRHRDYGNLTSSYYNNLIQQVYLGTIDAAVGDITITAQRSLHVDFTLPFTGNEATFIVPTKQENKKDPWIFIKPLTWELWVTSFCFFVFIGFVVWVLEHGVNKESRVPPSHQVDTSLWFSLSTLVFSQWERIHSKLARFVVIIWVFMGLILTQSYTASLTTLLTVEQLRPTVTNINQLIQNGESVGFQYGSFSLEFLRRMGFDDSKLRAYKTAEECDRLLTMGSRNGGIAAAFDEISYLQVLLSRYCSKYTTIGPTIQTQGFAFAFRRTSPFVPDFPRAILNLTERNKDIMKAIADKWFMNGSLCPQPSSVDASYSLDLDSFRGLFVLSAIASSSALIIYAAAFLCRRGREFMQFYSNDSLW 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01805 878 PIRSF IGluLR_plant 1 876 IPR017103 -
Bva09g01805 878 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 869 - -
Bva09g01805 878 Pfam Receptor family ligand binding region 48 399 IPR001828 -
Bva09g01805 878 PANTHER GLUTAMATE RECEPTOR 2.9 31 869 - -
Bva09g01805 878 SUPERFAMILY Periplasmic binding protein-like I 31 446 IPR028082 -
Bva09g01805 878 SMART GluR_14 463 817 IPR001320 GO:0015276|GO:0016020
Bva09g01805 878 CDD PBP1_GABAb_receptor_plant 32 420 IPR044440 -
Bva09g01805 878 Pfam Bacterial extracellular solute-binding proteins, family 3 482 816 IPR001638 -
Bva09g01805 878 SUPERFAMILY Periplasmic binding protein-like II 441 817 - -
Bva09g01805 878 Pfam Ligand-gated ion channel 817 848 IPR001320 GO:0015276|GO:0016020
Bva09g01805 878 Gene3D - 583 722 - -
Bva09g01805 878 CDD GluR_Plant 462 815 - -
Bva09g01805 878 Gene3D - 458 582 - -
Bva09g01805 878 Gene3D - 65 391 - -
Bva09g01805 878 Gene3D - 147 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01805 Bva-Chr9 12439890 12444859 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01805 31 878 Ion Channels AT2G29100 46.588 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01805 K05387 - qsu:112022976 894.419