Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01797 ATGAAACCCATTACTTGTCTTTCCATCTTCTATGTTTCAATATATTGTAGCTGCTTTGCCATGGGACCAAGCTCCAGCGAATCGGTTAAGTTAGTTAATGTGGGTGTGATTCTCGACACAGCTGACGCATGGATTGGTAAGTTGTGTTTGAGTTGCATCCAAATGGCACACTCGGATTTCTATGCTATCCACAGTTACTATAACACTAGACTTGTTCTCCATGTCAAAGATTCTAAAAGTGAGCTGATTGCCGCTGCTTCAGCAGCTTtagatttgataaaaaatgaagcaGTGCAAGCCATTATAGGGCCACAAGATTCAATGCAAACCAACCTGATTATAGATGTCTGTAACAAAGCAAGGGTGCCAATCCTTTCATTCTCAGCAACAAGTCCTTCCCTGGCTTCCCCTCAGAATCCTTATTTTTACCGAATTGCCCCGAATGAGTGTGCTCAAGCACAAGCCATTTCAGCACTTTTCCAAGCTTTCCAATGGAGAGAAGTGGTGCCCATATACATACAAGGCATGTTCTCTGAGGAAGTAATATCCTGCATAACTCGAGCCTTGCAAGAAGCTAATATCCATGTTTCTTATCTAGCTGCAATTCACCACTCACCAGATGATAACCAAATTGTCCAAGAGCTTCACAAATTAACAACTTTGACAACAAGAGTCTTCATTGTGCACATGTCTCCCATGTTTGGTTCCCGTCTCTTTGCCATGGCAAAAGAGATTGGAATGATGAGTGAAGGCTATGTTTGGATCCTCACCAGTGAAATGACTAACCAGTTGACCTCTTTAAATTCTTCAATCACTGATACGATGCAGGGTGTTCTAGGTTTAGGTGCATATTTTCCTAAAACAAAGGAGTTTCAACATTTTCAGGTAGGTtggaaatcaaaatttcaacaagaaaatCCCACCATTATAGGACCTGAATTGAATGTTTACTGCCTTTGGGCTTATGATGCTGTAACAGCACTTGCCATGGCAGTTGAGAAGGCTGGGGTCAAAGAATTTGGCTTTCAAAATACTGGTATATATTCCAGCAATACAACAGATTTTGAAACTGATCTTGGAGTTTCTTTGATTGGTCCAAAACTCAGAAAATCTCTATCAGAAACCAGATTTCGAGGACTTTCAGGTGATTTCAATCTGGTTGACGGAGAAGTCAACTCATCAATTTTCCAGATAATTAATGTGTTTGGTGATGGAAAAAAGGTAGTAGGATTTTGGACACCAGAAAATGGACTGACAAGAAAAGTCAATTCAACAAAGACAAACACAGACACAGGCATATACTCAACTTCCAAGACCAATTTAGGACCAATTATATGGCCAGGAGACTCTTCCTTTGCACCTGAAGGCTGGGATTTACTAgcaaacagaaagaaattgaGGATTGGAATTCCGGTCAAGCCCGGATATGAATTGGATGAATTGGTTAGTGCGCATTATGATCCAGTTACCAACAGAATAAATGTGAGTGGCTACTGTATAGATGTTTTTAAGGTTGTAATGGACGCATTACCATATCATGTTCCATATGAATTCATTCCTTTTAACCCTAGAGATTATGAGAACTTTAGCACAGGTTCCTTCTACGATGATTTGATGCGGGAAGTCTATCTTGGAAAATTTGATGCTGCGGTGGGAGATATAACGATTCGAGCTCAGAGATCGCTGTATGTGGACTTCACGATACCTTTCACAGAAAATGAAGCAACTTTTATAGTGCCAATCGaacagaagagaaagaaagacgCTTGGGTCTTCTTGAAACCTTTGACATGGGAATTATGGGTCACAAGTGTTTGCTTCTTTGTGTTCATTGGTTTCGTGGTTTGGCTGCTGGAACGCGGAGTCAATAAAGAAGAATTTAGGGGTTGCCCCTCAGATCAAGTGGGTACAAGCCTTTGGTCTTCCTTCTCAACCTTGGTATTTTCACAATGGCAGAGAATCCATAGCAACTTAGCAAGGTTTGTGGTGATCATATGGGTTTTTGTGGGGCTGATATTGACCCAGAGTTATACAGCAAGCTTGACAACACTTTTGACAGTGGAACAGCTCCGACCCACCGTGACAGATGTAAATCAGCTCATACAGAGTGGAGACTATATTGGACACCAACATGGTTCCTCTATTATTGAATTCTTAAGAAAAATGGGTTTTGATGATACCAAGCTTCGTGTTGTTAGGTCTATTGAAGAAAGTGATCACCTTCTAACATTAGGAAGCAGAAATGGAGGTATTGCTGCATCCTTTGCCGAAACCccatatataaaagttatgcAGTCAAGGTATTGCTCCAAATATACAACCATTGGACCAAGTTACCAGAGTCAAGGATTTGGCTTTGCTTTTAGAAGAAACTCCCCATTTGTAACTGATGTTTCAAGGGCAATCTTAAACTTGACAGAGAAAAATCAAGATATTATGAAAGCAATTGTAAACAAATGGTTCAACAATAAATCACGTTGTTTGCAACCCTCCATTGTGGATGCTTCCTATATTCTGGATCTTGACAGTTTCCATGGACTATTCCTCTTATCTGGGATTGCCTCATCGTTAGCGCTTATCATATACGCAGCTGCTTTCTTATACAAACATTGGCAGGAATTAAAGCAGTTTCATGCAAACGATTCACTGTGGAAAAGAATttgtattttgttaattatctTAAGACAAAATGACATTAGGATCCGAACAGGTATCCAGAACTACTTCTACGATTA 2735 0.3879 MKPITCLSIFYVSIYCSCFAMGPSSSESVKLVNVGVILDTADAWIGKLCLSCIQMAHSDFYAIHSYYNTRLVLHVKDSKSELIAAASAALDLIKNEAVQAIIGPQDSMQTNLIIDVCNKARVPILSFSATSPSLASPQNPYFYRIAPNECAQAQAISALFQAFQWREVVPIYIQGMFSEEVISCITRALQEANIHVSYLAAIHHSPDDNQIVQELHKLTTLTTRVFIVHMSPMFGSRLFAMAKEIGMMSEGYVWILTSEMTNQLTSLNSSITDTMQGVLGLGAYFPKTKEFQHFQVGWKSKFQQENPTIIGPELNVYCLWAYDAVTALAMAVEKAGVKEFGFQNTGIYSSNTTDFETDLGVSLIGPKLRKSLSETRFRGLSGDFNLVDGEVNSSIFQIINVFGDGKKVVGFWTPENGLTRKVNSTKTNTDTGIYSTSKTNLGPIIWPGDSSFAPEGWDLLANRKKLRIGIPVKPGYELDELVSAHYDPVTNRINVSGYCIDVFKVVMDALPYHVPYEFIPFNPRDYENFSTGSFYDDLMREVYLGKFDAAVGDITIRAQRSLYVDFTIPFTENEATFIVPIEQKRKKDAWVFLKPLTWELWVTSVCFFVFIGFVVWLLERGVNKEEFRGCPSDQVGTSLWSSFSTLVFSQWQRIHSNLARFVVIIWVFVGLILTQSYTASLTTLLTVEQLRPTVTDVNQLIQSGDYIGHQHGSSIIEFLRKMGFDDTKLRVVRSIEESDHLLTLGSRNGGIAASFAETPYIKVMQSRYCSKYTTIGPSYQSQGFGFAFRRNSPFVTDVSRAILNLTEKNQDIMKAIVNKWFNNKSRCLQPSIVDASYILDLDSFHGLFLLSGIASSLALIIYAAAFLYKHWQELKQFHANDSLWKRICILLIILRQNDIRIRTGIQNYFYD 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01797 911 PANTHER GLUTAMATE RECEPTOR 2.9 32 895 - -
Bva09g01797 911 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 895 - -
Bva09g01797 911 CDD PBP1_GABAb_receptor_plant 33 421 IPR044440 -
Bva09g01797 911 Gene3D - 148 415 - -
Bva09g01797 911 PIRSF IGluLR_plant 1 899 IPR017103 -
Bva09g01797 911 SUPERFAMILY Periplasmic binding protein-like II 443 823 - -
Bva09g01797 911 Pfam Ligand-gated ion channel 823 854 IPR001320 GO:0015276|GO:0016020
Bva09g01797 911 Gene3D - 589 731 - -
Bva09g01797 911 CDD GluR_Plant 464 821 - -
Bva09g01797 911 Pfam Receptor family ligand binding region 49 401 IPR001828 -
Bva09g01797 911 Gene3D - 460 588 - -
Bva09g01797 911 Pfam Bacterial extracellular solute-binding proteins, family 3 484 822 IPR001638 -
Bva09g01797 911 Gene3D - 38 394 - -
Bva09g01797 911 SUPERFAMILY Periplasmic binding protein-like I 33 448 IPR028082 -
Bva09g01797 911 SMART GluR_14 465 823 IPR001320 GO:0015276|GO:0016020
Bva09g01797 911 Gene3D - 761 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01797 Bva-Chr9 12322239 12327462 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01797 5 903 Ion Channels AT2G29100 44.778 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01797 K05387 - qsu:112022976 915.605